| Gene function and cell surface protein association analysis based on single-cell multiomics data H Hu, Z Feng, H Lin, J Cheng, J Lyu, Y Zhang, J Zhao, F Xu, T Lin, Q Zhao, ... Computers in Biology and Medicine, 106733, 2023 | | 2023 |
| Investigating cardiotoxicity related with hERG channel blockers using molecular fingerprints and graph attention mechanism T Wang, J Sun, Q Zhao Computers in Biology and Medicine 153, 106464, 2023 | 1 | 2023 |
| qPTM: an updated database for PTM dynamics in human, mouse, rat and yeast K Yu, Y Wang, Y Zheng, Z Liu, Q Zhang, S Wang, Q Zhao, X Zhang, X Li, ... Nucleic Acids Research 51 (D1), D479-D487, 2023 | 1 | 2023 |
| VSOLassoBag: a variable-selection oriented LASSO bagging algorithm for biomarker discovery in omic-based translational research J Liang, C Wang, D Zhang, Y Xie, Y Zeng, T Li, Z Zuo, J Ren, Q Zhao Journal of Genetics and Genomics, 2023 | | 2023 |
| Untangle the broad connections and tight interactions between human microbiota and complex diseases through data-driven approaches L Wang, ZB Zhu, L Zhang, J Li, Q Zhao Frontiers in Microbiology 14, 2023 | | 2023 |
| dSCOPE: a software to detect sequences critical for liquid–liquid phase separation K Yu, Z Liu, H Cheng, S Li, Q Zhang, J Liu, HQ Ju, Z Zuo, Q Zhao, S Kang, ... Briefings in Bioinformatics 24 (1), bbac550, 2023 | 2 | 2023 |
| Modeling and analyzing single-cell multimodal data with deep parametric inference H Hu, Z Feng, H Lin, J Zhao, Y Zhang, F Xu, L Chen, F Chen, Y Ma, J Su, ... Briefings in Bioinformatics 24 (1), bbad005, 2023 | 1 | 2023 |
| Building an ensemble learning model for gastric cancer cell line classification via rapid raman spectroscopy K Liu, B Liu, Y Zhang, Q Wu, M Zhong, L Shang, Y Wang, P Liang, ... Computational and Structural Biotechnology Journal 21, 802-811, 2023 | 1 | 2023 |
| Predicting potential interactions between lncRNAs and proteins via combined graph auto-encoder methods J Zhao, J Sun, SC Shuai, Q Zhao, J Shuai Briefings in Bioinformatics 24 (1), bbac527, 2023 | 3 | 2023 |
| CITEMOXMBD: A flexible single-cell multimodal omics analysis framework to reveal the heterogeneity of immune cells H Hu, R Liu, C Zhao, Y Lu, Y Xiong, L Chen, J Jin, Y Ma, J Su, Z Yu, ... RNA biology 19 (1), 290-304, 2022 | 7 | 2022 |
| Long noncoding RNA Ftx regulates the protein expression profile in HCT116 human colon cancer cells R Jia, L Song, Z Fei, C Qin, Q Zhao Proteome Science 20 (1), 1-12, 2022 | 1 | 2022 |
| Phase 1 multicenter, dose-expansion study of ARX788 as monotherapy in HER2-positive advanced gastric and gastroesophageal junction adenocarcinoma Y Zhang, MZ Qiu, JF Wang, YQ Zhang, A Shen, XL Yuan, T Zhang, ... Cell Reports Medicine 3 (11), 100814, 2022 | 2 | 2022 |
| Predicting the potential human lncrna–mirna interactions based on graph convolution network with conditional random field W Wang, L Zhang, J Sun, Q Zhao, J Shuai Briefings in Bioinformatics 23 (6), bbac463, 2022 | 8 | 2022 |
| DeepLncPro: an interpretable convolutional neural network model for identifying long non-coding RNA promoters T Zhang, Q Tang, F Nie, Q Zhao, W Chen Briefings in Bioinformatics 23 (6), bbac447, 2022 | | 2022 |
| Regulation of endoplasmic reticulum and mitochondria in cellular homeostasis Y Huang, J Ji, J Song, Q Zhao Frontiers Media SA, 2022 | 1 | 2022 |
| Deciphering clonal dynamics and metastatic routines in a rare patient of synchronous triple-primary tumors and multiple metastases with MPTevol Q Chen, QN Wu, YM Rong, S Wang, Z Zuo, L Bai, B Zhang, S Yuan, ... Briefings in Bioinformatics 23 (5), 2022 | | 2022 |
| A merged molecular representation deep learning method for blood–brain barrier permeability prediction Q Tang, F Nie, Q Zhao, W Chen Briefings in Bioinformatics 23 (5), 2022 | 11 | 2022 |
| De Novo design of potential inhibitors against SARS-CoV-2 Mpro S Li, L Wang, J Meng, Q Zhao, L Zhang, H Liu Computers in Biology and Medicine 147, 105728, 2022 | 1 | 2022 |
| IBS 2.0: an upgraded illustrator for the visualization of biological sequences Y Xie, H Li, X Luo, H Li, Q Gao, L Zhang, Y Teng, Q Zhao, Z Zuo, J Ren Nucleic Acids Research 50 (W1), W420-W426, 2022 | 4 | 2022 |
| Genomic temporal heterogeneity of circulating tumour DNA in unresectable metastatic colorectal cancer under first-line treatment F Wang, YS Huang, HX Wu, ZX Wang, Y Jin, YC Yao, YX Chen, Q Zhao, ... Gut 71 (7), 1340-1349, 2022 | 7 | 2022 |
