Genome evolution and adaptation in a long-term experiment with Escherichia coli JE Barrick, DS Yu, SH Yoon, H Jeong, TK Oh, D Schneider, RE Lenski, ... Nature 461 (7268), 1243-1247, 2009 | 1393 | 2009 |
Identification of Mutations in Laboratory-Evolved Microbes from Next-Generation Sequencing Data Using breseq DE Deatherage, JE Barrick Engineering and analyzing multicellular systems: methods and protocols, 165-188, 2014 | 1357 | 2014 |
Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria M Mandal, B Boese, JE Barrick, WC Winkler, RR Breaker cell 113 (5), 577-586, 2003 | 921 | 2003 |
Genome dynamics during experimental evolution JE Barrick, RE Lenski Nature Reviews Genetics 14 (12), 827-839, 2013 | 738 | 2013 |
The dynamics of molecular evolution over 60,000 generations BH Good, MJ McDonald, JE Barrick, RE Lenski, MM Desai Nature 551 (7678), 45-50, 2017 | 700 | 2017 |
Genomic analysis of a key innovation in an experimental Escherichia coli population ZD Blount, JE Barrick, CJ Davidson, RE Lenski Nature 489 (7417), 513-518, 2012 | 672 | 2012 |
A glycine-dependent riboswitch that uses cooperative binding to control gene expression M Mandal, M Lee, JE Barrick, Z Weinberg, GM Emilsson, WL Ruzzo, ... Science 306 (5694), 275-279, 2004 | 650 | 2004 |
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control JE Barrick, KA Corbino, WC Winkler, A Nahvi, M Mandal, J Collins, M Lee, ... Proceedings of the National Academy of Sciences 101 (17), 6421-6426, 2004 | 603 | 2004 |
The distributions, mechanisms, and structures of metabolite-binding riboswitches JE Barrick, RR Breaker Genome biology 8, 1-19, 2007 | 577 | 2007 |
An mRNA structure that controls gene expression by binding S-adenosylmethionine WC Winkler, A Nahvi, N Sudarsan, JE Barrick, RR Breaker Nature Structural & Molecular Biology 10 (9), 701-707, 2003 | 567 | 2003 |
Metabolite-binding RNA domains are present in the genes of eukaryotes N Sudarsan, JE Barrick, RR Breaker Rna 9 (6), 644-647, 2003 | 558 | 2003 |
Repeatability and contingency in the evolution of a key innovation in phage lambda JR Meyer, DT Dobias, JS Weitz, JE Barrick, RT Quick, RE Lenski Science 335 (6067), 428-432, 2012 | 520 | 2012 |
Tempo and mode of genome evolution in a 50,000-generation experiment O Tenaillon, JE Barrick, N Ribeck, DE Deatherage, JL Blanchard, ... Nature 536 (7615), 165-170, 2016 | 470 | 2016 |
Coenzyme B12 riboswitches are widespread genetic control elements in prokaryotes A Nahvi, JE Barrick, RR Breaker Nucleic acids research 32 (1), 143-150, 2004 | 408 | 2004 |
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline Z Weinberg, JE Barrick, Z Yao, A Roth, JN Kim, J Gore, JX Wang, ER Lee, ... Nucleic acids research 35 (14), 4809-4819, 2007 | 406 | 2007 |
Second-order selection for evolvability in a large Escherichia coli population RJ Woods, JE Barrick, TF Cooper, U Shrestha, MR Kauth, RE Lenski Science 331 (6023), 1433-1436, 2011 | 364 | 2011 |
Tandem riboswitch architectures exhibit complex gene control functions N Sudarsan, MC Hammond, KF Block, R Welz, JE Barrick, A Roth, ... Science 314 (5797), 300-304, 2006 | 322 | 2006 |
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter JE Barrick, N Sudarsan, Z Weinberg, WL Ruzzo, RR Breaker Rna 11 (5), 774-784, 2005 | 303 | 2005 |
A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain A Roth, WC Winkler, EE Regulski, BWK Lee, J Lim, I Jona, JE Barrick, ... Nature structural & molecular biology 14 (4), 308-317, 2007 | 299 | 2007 |
Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria KA Corbino, JE Barrick, J Lim, R Welz, BJ Tucker, I Puskarz, M Mandal, ... Genome biology 6, 1-10, 2005 | 295 | 2005 |