| The quantitative proteome of a human cell line M Beck, A Schmidt, J Malmstroem, M Claassen, A Ori, A Szymborska, ... Molecular systems biology 7 (1), 549, 2011 | 933 | 2011 |
| OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data HL Röst, G Rosenberger, P Navarro, L Gillet, SM Miladinović, ... Nature biotechnology 32 (3), 219-223, 2014 | 814 | 2014 |
| A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas T Farrah, EW Deutsch, GS Omenn, DS Campbell, Z Sun, JA Bletz, ... Molecular & cellular proteomics 10 (9), 2011 | 496 | 2011 |
| Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans J Malmström, M Beck, A Schmidt, V Lange, EW Deutsch, R Aebersold Nature 460 (7256), 762-765, 2009 | 493 | 2009 |
| Simian Virus 40 depends on ER protein folding and quality control factors for entry into host cells M Schelhaas, J Malmström, L Pelkmans, J Haugstetter, L Ellgaard, ... Cell 131 (3), 516-529, 2007 | 366 | 2007 |
| A high-quality catalog of the Drosophila melanogaster proteome E Brunner, CH Ahrens, S Mohanty, H Baetschmann, S Loevenich, ... Nature biotechnology 25 (5), 576-583, 2007 | 324 | 2007 |
| Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes SP Schrimpf, M Weiss, L Reiter, CH Ahrens, M Jovanovic, J Malmström, ... PLoS biology 7 (3), e1000048, 2009 | 251 | 2009 |
| Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring V Lange, JA Malmström, J Didion, NL King, BP Johansson, J Schäfer, ... Molecular & Cellular Proteomics 7 (8), 1489-1500, 2008 | 236 | 2008 |
| PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells B Bodenmiller, J Malmstrom, B Gerrits, D Campbell, H Lam, A Schmidt, ... Molecular systems biology 3 (1), 139, 2007 | 223 | 2007 |
| Perspectives of targeted mass spectrometry for protein biomarker verification R Hüttenhain, J Malmström, P Picotti, R Aebersold Current opinion in chemical biology 13 (5-6), 518-525, 2009 | 208 | 2009 |
| Complete removal of extracellular IgG antibodies in a randomized dose-escalation phase I study with the bacterial enzyme IdeS–a novel therapeutic opportunity L Winstedt, S Järnum, EA Nordahl, A Olsson, A Runström, R Bockermann, ... PLoS One 10 (7), e0132011, 2015 | 168 | 2015 |
| Visual proteomics of the human pathogen Leptospira interrogans M Beck, JA Malmström, V Lange, A Schmidt, EW Deutsch, R Aebersold Nature methods 6 (11), 817-823, 2009 | 163 | 2009 |
| Transforming growth factor-β1 specifically induce proteins involved in the myofibroblast contractile apparatus J Malmstrom, H Lindberg, C Lindberg, C Bratt, E Wieslander, EL Delander, ... Molecular & Cellular Proteomics 3 (5), 466-477, 2004 | 162 | 2004 |
| Biosynthesis of dermatan sulfate: chondroitin-glucuronate C5-epimerase is identical to SART2 M Maccarana, B Olander, J Malmstrom, K Tiedemann, R Aebersold, ... Journal of Biological Chemistry 281 (17), 11560-11568, 2006 | 143 | 2006 |
| Advances in proteomic workflows for systems biology J Malmström, H Lee, R Aebersold Current opinion in biotechnology 18 (4), 378-384, 2007 | 136 | 2007 |
| Antibody orientation at bacterial surfaces is related to invasive infection P Nordenfelt, S Waldemarson, A Linder, M Mörgelin, C Karlsson, ... Journal of Experimental Medicine 209 (13), 2367-2381, 2012 | 129 | 2012 |
| DIANA—algorithmic improvements for analysis of data-independent acquisition MS data J Teleman, HL Röst, G Rosenberger, U Schmitt, L Malmström, ... Bioinformatics 31 (4), 555-562, 2015 | 118 | 2015 |
| Absolute quantification of microbial proteomes at different states by directed mass spectrometry A Schmidt, M Beck, J Malmström, H Lam, M Claassen, D Campbell, ... Molecular systems biology 7 (1), 510, 2011 | 115 | 2011 |
| Rtt101 and Mms1 in budding yeast form a CUL4DDB1‐like ubiquitin ligase that promotes replication through damaged DNA IW Zaidi, G Rabut, A Poveda, H Scheel, J Malmström, H Ulrich, ... EMBO reports 9 (10), 1034-1040, 2008 | 115 | 2008 |
| Large-scale inference of protein tissue origin in gram-positive sepsis plasma using quantitative targeted proteomics E Malmström, O Kilsgård, S Hauri, E Smeds, H Herwald, L Malmström, ... Nature communications 7 (1), 10261, 2016 | 110 | 2016 |
