A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ... Nature Neuroscience, 1-11, 2019 | 708 | 2019 |
Transcriptional signature in microglia associated with Aβ plaque phagocytosis A Grubman, XY Choo, G Chew, JF Ouyang, G Sun, NP Croft, FJ Rossello, ... Nature communications 12 (1), 3015, 2021 | 186 | 2021 |
Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal–maternal interface S Buckberry, T Bianco-Miotto, SJ Bent, GA Dekker, CT Roberts Molecular human reproduction 20 (8), 810-819, 2014 | 170 | 2014 |
Reprogramming roadmap reveals route to human induced trophoblast stem cells X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ... Nature 586 (7827), 101-107, 2020 | 165 | 2020 |
Transient and permanent reconfiguration of chromatin and transcription factor occupancy drive reprogramming AS Knaupp, S Buckberry, J Pflueger, SM Lim, E Ford, MR Larcombe, ... Cell stem cell 21 (6), 834-845. e6, 2017 | 121 | 2017 |
Large scale gene expression meta-analysis reveals tissue-specific, sex-biased gene expression in humans BT Mayne, T Bianco-Miotto, S Buckberry, J Breen, V Clifton, C Shoubridge, ... Frontiers in genetics 7, 183, 2016 | 119 | 2016 |
The emergence of the brain non-CpG methylation system in vertebrates A de Mendoza, D Poppe, S Buckberry, J Pflueger, CB Albertin, T Daish, ... Nature ecology & evolution 5 (3), 369-378, 2021 | 81 | 2021 |
Hypoxia induced HIF-1/HIF-2 activity alters trophoblast transcriptional regulation and promotes invasion AR Highet, SM Khoda, S Buckberry, S Leemaqz, T Bianco-Miotto, ... European journal of cell biology 94 (12), 589-602, 2015 | 81 | 2015 |
Recent progress towards understanding the role of DNA methylation in human placental development T Bianco-Miotto, BT Mayne, S Buckberry, J Breen, CMR Lopez, ... Reproduction 152 (1), R23-R30, 2016 | 78 | 2016 |
Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution CA Herring, RK Simmons, S Freytag, D Poppe, JJD Moffet, J Pflueger, ... Cell 185 (23), 4428-4447. e28, 2022 | 68 | 2022 |
Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons A de Mendoza, A Bonnet, DB Vargas-Landin, N Ji, H Li, F Yang, L Li, ... Nature communications 9 (1), 1341, 2018 | 59 | 2018 |
Convergent evolution of a vertebrate-like methylome in a marine sponge A de Mendoza, WL Hatleberg, K Pang, S Leininger, O Bogdanovic, ... Nature ecology & evolution 3 (10), 1464-1473, 2019 | 57 | 2019 |
Cell type of origin dictates the route to pluripotency CM Nefzger, FJ Rossello, J Chen, X Liu, AS Knaupp, J Firas, JM Paynter, ... Cell reports 21 (10), 2649-2660, 2017 | 57 | 2017 |
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability A de Mendoza, TV Nguyen, E Ford, D Poppe, S Buckberry, J Pflueger, ... Genome Biology 23 (1), 163, 2022 | 52 | 2022 |
Zinc is a critical regulator of placental morphogenesis and maternal hemodynamics during pregnancy in mice RL Wilson, SY Leemaqz, Z Goh, D McAninch, T Jankovic-Karasoulos, ... Scientific reports 7 (1), 15137, 2017 | 48 | 2017 |
Imprinted and X-linked non-coding RNAs as potential regulators of human placental function S Buckberry, T Bianco-Miotto, CT Roberts epigenetics 9 (1), 81-89, 2014 | 48 | 2014 |
Quantitative Allele-Specific Expression and DNA Methylation Analysis of H19, IGF2 and IGF2R in the Human Placenta across Gestation Reveals H19 Imprinting … S Buckberry, T Bianco-Miotto, S Hiendleder, CT Roberts PLoS One 7 (12), e51210, 2012 | 44 | 2012 |
massiR : a method for predicting the sex of samples in gene expression microarray datasets S Buckberry, SJ Bent, T Bianco-Miotto, CT Roberts Bioinformatics 30 (14), 2084-2085, 2014 | 35 | 2014 |
Vitamin D receptor gene ablation in the conceptus has limited effects on placental morphology, function and pregnancy outcome RL Wilson, S Buckberry, F Spronk, JA Laurence, S Leemaqz, S O’Leary, ... PloS one 10 (6), e0131287, 2015 | 33 | 2015 |
Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation S Buckberry, T Bianco-Miotto, SJ Bent, V Clifton, C Shoubridge, ... BMC genomics 18, 1-13, 2017 | 31 | 2017 |