Efficient strategies for leave-one-out cross validation for genomic best linear unbiased prediction H Cheng, DJ Garrick, RL Fernando Journal of animal science and biotechnology 8, 1-5, 2017 | 145 | 2017 |
Computational strategies for alternative single-step Bayesian regression models with large numbers of genotyped and non-genotyped animals RL Fernando, H Cheng, BL Golden, DJ Garrick Genetics Selection Evolution 48, 1-8, 2016 | 84 | 2016 |
JWAS: Julia implementation of whole-genome analysis software H Cheng, R Fernando, D Garrick Proceedings of the world congress on genetics applied to livestock …, 2018 | 83* | 2018 |
Genomic prediction from multiple-trait Bayesian regression methods using mixture priors H Cheng, K Kizilkaya, J Zeng, D Garrick, R Fernando Genetics 209 (1), 89-103, 2018 | 67 | 2018 |
An upper bound for accuracy of prediction using GBLUP E Karaman, H Cheng, MZ Firat, DJ Garrick, RL Fernando PloS one 11 (8), e0161054, 2016 | 60 | 2016 |
Combining phenotype, genotype, and environment to uncover genetic components underlying water use efficiency in Persian walnut MM Arab, A Marrano, R Abdollahi-Arpanahi, CA Leslie, H Cheng, ... Journal of experimental botany 71 (3), 1107-1127, 2020 | 57 | 2020 |
In vitro breeding: application of embryonic stem cells to animal production DE Goszczynski, H Cheng, S Demyda-Peyrás, JF Medrano, J Wu, ... Biology of reproduction 100 (4), 885-895, 2019 | 55 | 2019 |
Genome-wide association analysis and accuracy of genome-enabled breeding value predictions for resistance to infectious hematopoietic necrosis virus in a commercial rainbow … RL Vallejo, H Cheng, BO Fragomeni, KL Shewbridge, G Gao, ... Genetics Selection Evolution 51, 1-14, 2019 | 50 | 2019 |
Pitfalls and remedies for cross validation with multi-trait genomic prediction methods D Runcie, H Cheng G3: Genes, Genomes, Genetics 9 (11), 3727-3741, 2019 | 49 | 2019 |
MegaLMM: mega-scale linear mixed models for genomic predictions with thousands of traits DE Runcie, J Qu, H Cheng, L Crawford Genome biology 22, 1-25, 2021 | 48 | 2021 |
Pilot study: Application of artificial intelligence for detecting left atrial enlargement on canine thoracic radiographs S Li, Z Wang, LC Visser, ER Wisner, H Cheng Veterinary Radiology & Ultrasound, 2020 | 46 | 2020 |
A compendium of genetic regulatory effects across pig tissues J Teng, Y Gao, H Yin, Z Bai, S Liu, H Zeng, PigGTEx Consortium, L Bai, ... Nature genetics 56 (1), 112-123, 2024 | 43 | 2024 |
Comparison of alternative approaches to single-trait genomic prediction using genotyped and non-genotyped Hanwoo beef cattle J Lee, H Cheng, D Garrick, B Golden, J Dekkers, K Park, D Lee, ... Genetics Selection Evolution 49, 1-9, 2017 | 41 | 2017 |
Deciphering of the Genetic Control of Phenology, Yield, and Pellicle Color in Persian Walnut (Juglans regia L.) A Marrano, GM Sideli, CA Leslie, H Cheng, DB Neale Frontiers in plant science 10, 1140, 2019 | 40 | 2019 |
Runs of homozygosity in a selected cattle population with extremely inbred bulls: Descriptive and functional analyses revealed highly variable patterns D Goszczynski, A Molina, E Terán, H Morales-Durand, P Ross, H Cheng, ... PLoS One 13 (7), e0200069, 2018 | 40 | 2018 |
A fast and efficient Gibbs sampler for BayesB in whole-genome analyses H Cheng, L Qu, DJ Garrick, RL Fernando Genetics Selection Evolution 47, 1-7, 2015 | 40 | 2015 |
An efficient exact method to obtain GBLUP and single-step GBLUP when the genomic relationship matrix is singular RL Fernando, H Cheng, DJ Garrick Genetics Selection Evolution 48, 1-12, 2016 | 34 | 2016 |
XSim: simulation of descendants from ancestors with sequence data H Cheng, D Garrick, R Fernando G3: Genes, Genomes, Genetics 5 (7), 1415-1417, 2015 | 25 | 2015 |
Assessing accuracy of genomic predictions for resistance to infectious hematopoietic necrosis virus with progeny testing of selection candidates in a commercial rainbow trout … RL Vallejo, BO Fragomeni, H Cheng, G Gao, RL Long, KL Shewbridge, ... Frontiers in Veterinary Science 7, 590048, 2020 | 24 | 2020 |
Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping GM Sideli, A Marrano, S Montanari, CA Leslie, BJ Allen, H Cheng, ... PLoS One 15 (4), e0231144, 2020 | 24 | 2020 |