Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula A Branca, TD Paape, P Zhou, R Briskine, AD Farmer, J Mudge, AK Bharti, ... Proceedings of the National Academy of Sciences 108 (42), E864-E870, 2011 | 272 | 2011 |
Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes P Gladieux, J Ropars, H Badouin, A Branca, G Aguileta, DM De Vienne, ... Molecular ecology 23 (4), 753-773, 2014 | 217 | 2014 |
Multiple recent horizontal transfers of a large genomic region in cheese making fungi K Cheeseman, J Ropars, P Renault, J Dupont, J Gouzy, A Branca, ... Nature Communications 5 (2876), 1-9, 2014 | 205 | 2014 |
Adaptive horizontal gene transfers between multiple cheese-associated fungi J Ropars, RCR de la Vega, M López-Villavicencio, J Gouzy, E Sallet, ... Current Biology 25 (19), 2562-2569, 2015 | 119 | 2015 |
Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae H Badouin, ME Hood, J Gouzy, G Aguileta, S Siguenza, MH Perlin, ... Genetics 200 (4), 1275-1284, 2015 | 92 | 2015 |
Population Genomics of the Facultatively Mutualistic Bacteria Sinorhizobium meliloti and S. medicae B Epstein, A Branca, J Mudge, AK Bharti, R Briskine, AD Farmer, ... Public Library of Science 8 (8), e1002868, 2012 | 91 | 2012 |
Host–Pathogen Coevolution: The Selective Advantage of Bacillus thuringiensis Virulence and Its Cry Toxin Genes L Masri, A Branca, AE Sheppard, A Papkou, D Laehnemann, ... PLoS Biology 13 (6), 2015 | 82 | 2015 |
Fine-Scale Population Recombination Rates, Hotspots, and Correlates of Recombination in the Medicago truncatula Genome T Paape, P Zhou, A Branca, R Briskine, N Young, P Tiffin Genome biology and evolution 4 (5), 726-737, 2012 | 82 | 2012 |
Independent domestication events in the blue‐cheese fungus Penicillium roqueforti E Dumas, A Feurtey, RC Rodríguez de la Vega, S Le Prieur, A Snirc, ... Molecular Ecology 29 (14), 2639-2660, 2020 | 72 | 2020 |
Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates H Badouin, P Gladieux, J Gouzy, S Siguenza, G Aguileta, A Snirc, ... Molecular Ecology 26 (7), 2041-2062, 2017 | 69 | 2017 |
Insights into Penicillium roqueforti morphological and genetic diversity G Gillot, JL Jany, M Coton, G Le Floch, S Debaets, J Ropars, ... PLoS One 10 (6), e0129849, 2015 | 64 | 2015 |
Permanent genetic resources added to molecular ecology resources database 1 January 2009–30 April 2009 Molecular Ecology Resources Primer Development Consortium, ... Molecular ecology resources 9 (5), 1375-1379, 2009 | 60 | 2009 |
Evolution of a polydnavirus gene in relation to parasitoid–host species immune resistance S Dupas, CW Gitau, A Branca, BP Le Rü, JFÇ Silvain Journal of Heredity 99 (5), 491-499, 2008 | 58 | 2008 |
Intraspecific specialization of the generalist parasitoid Cotesia sesamiae revealed by polyDNAvirus polymorphism and associated with different Wolbachia infection A Branca, BP Le Ru, F Vavre, JF SILVAIN, S Dupas Molecular Ecology 20 (5), 959-971, 2011 | 53 | 2011 |
Strong effect of Penicillium roqueforti populations on volatile and metabolic compounds responsible for aromas, flavor and texture in blue cheeses T Caron, M Le Piver, AC Péron, P Lieben, R Lavigne, S Brunel, ... International Journal of Food Microbiology 354, 109174, 2021 | 51 | 2021 |
Genomic basis of the differences between cider and dessert apple varieties D Leforestier, E Ravon, H Muranty, A Cornille, C Lemaire, T Giraud, ... Evolutionary Applications 8 (7), 650-661, 2015 | 46 | 2015 |
Ongoing ecological speciation in Cotesia sesamiae, a biological control agent of cereal stem borers L Kaiser, BP Le Ru, F Kaoula, C Paillusson, C Capdevielle‐Dulac, ... Evolutionary Applications 8 (8), 807-820, 2015 | 39 | 2015 |
Current analysis of host–parasite interactions with a focus on next generation sequencing data JM Greenwood, AL Ezquerra, S Behrens, A Branca, L Mallet Zoology 119 (4), 298-306, 2016 | 38* | 2016 |
Phylogeography in continuous space: coupling species distribution models and circuit theory to assess the effect of contiguous migration at different climatic periods on … S Dupas, B Le Ru, A Branca, N Faure, G Gigot, P Campagne, M Sezonlin, ... Molecular ecology 23 (9), 2313-2325, 2014 | 25 | 2014 |
The Cotesia sesamiae story: insight into host-range evolution in a Hymenoptera parasitoid and implication for its use in biological control programs L Kaiser, S Dupas, A Branca, EA Herniou, CW Clarke, ... Genetica 145, 455-468, 2017 | 22 | 2017 |