The tumor profiler study: integrated, multi-omic, functional tumor profiling for clinical decision support A Irmisch, X Bonilla, S Chevrier, KV Lehmann, F Singer, N Toussaint, ... Cancer Cell, 2020 | 104 | 2020 |
SCIM: Universal Single-Cell Matching with Unpaired Feature Sets SG Stark, TP Consortium, J Ficek, K Lehmann, X Bonilla, F Locatello, ... Bioinformatics, 2020 | 49 | 2020 |
Single-cell copy number calling and event history reconstruction J Kuipers, MA Tuncel, P Ferreira, K Jahn, N Beerenwinkel BioRxiv, 2020 | 47 | 2020 |
A calcium-based plasticity model for predicting long-term potentiation and depression in the neocortex G Chindemi, M Abdellah, O Amsalem, R Benavides-Piccione, V Delattre, ... Nature Communications, 19, 2022 | 44 | 2022 |
An R-based reproducible and user-friendly preprocessing pipeline for CyTOF data HL Crowell, S Chevrier, A Jacobs, S Sivapatham, TP Consortium, ... F1000Research 9, 1263, 2020 | 37 | 2020 |
Establishing standardized immune phenotyping of metastatic melanoma by digital pathology B Sobottka, M Nowak, AL Frei, M Haberecker, S Merki, MP Levesque, ... Laboratory investigation 101 (12), 1561-1570, 2021 | 23 | 2021 |
Enhancing Children’s Experience with Recommendation Systems Y Deldjoo, C Frà, M Valla, A Paladini, D Anghileri, MA Tuncel, F Garzotta, ... Workshop on Children and Recommender Systems (KidRec'17)-11th ACM Conference …, 2017 | 23 | 2017 |
Connectome Mapper 3: A Flexible and Open-Source Pipeline Software for Multiscale Multimodal Human Connectome Mapping S Tourbier, J Rue-Queralt, K Glomb, Y Aleman-Gomez, E Mullier, A Griffa, ... The Journal of Open Source Software, 2022 | 17 | 2022 |
Thalamic control of sensory processing and spindles in a biophysical somatosensory thalamoreticular circuit model of wakefulness and sleep E Iavarone, J Simko, Y Shi, M Bertschy, M García-Amado, P Litvak, ... Cell Reports 42 (3), 2023 | 15 | 2023 |
Exploiting ladder networks for gene expression classification G Golcuk, MA Tuncel, A Canakoglu International conference on bioinformatics and biomedical engineering, 270-278, 2018 | 13 | 2018 |
scAmpi—A versatile pipeline for single-cell RNA-seq analysis from basics to clinics A Bertolini, M Prummer, MA Tuncel, U Menzel, ML Rosano-González, ... PLoS computational biology 18 (6), e1010097, 2022 | 12 | 2022 |
Data Encryption using Bio-Molecular Information B Bazli, MA Tuncel, D Llewellyn-Jones International Journal on Cryptography and Information Security (IJCIS) 4 (3), 2014 | 10 | 2014 |
Modeling and simulation of neocortical micro-and mesocircuitry. Part II: Physiology and experimentation JB Isbister, A Ecker, C Pokorny, S Bolaños-Puchet, DE Santander, ... bioRxiv, 2023.05. 17.541168, 2023 | 9 | 2023 |
A universal workflow for creation, validation and generalization of detailed neuronal models M Reva, C Rössert, A Arnaudon, T Damart, D Mandge, A Tuncel, ... Patterns, 100855, 2023 | 4 | 2023 |
Thalamic control of sensory enhancement and sleep spindle properties in a biophysical model of thalamoreticular microcircuitry E Iavarone, J Simko, Y Shi, M Bertschy, M García-Amado, P Litvak, ... bioRxiv, 2022.02. 28.482273, 2022 | 2 | 2022 |
Correction: Establishing standardized immune phenotyping of metastatic melanoma by digital pathology B Sobottka, M Nowak, AL Frei, M Haberecker, S Merki, MP Levesque, ... Laboratory Investigation; a Journal of Technical Methods and Pathology 101 …, 2021 | 2 | 2021 |
A Statistical Framework for the Analysis of Genomic Data MA Tuncel Polytechnic University of Milan, 2017 | 2 | 2017 |
Visualdrives forensic tool MA Tuncel, H Francis, M Taylor, DL Jones 2015 International Conference on Developments of E-Systems Engineering (DeSE …, 2015 | 2 | 2015 |
BlueCelluLab: Biologically Detailed Neural Network Experimentation API A Tuncel, W Van Geit, M Gevaert, B Torben-Nielsen, D Mandge, İ Kılıç, ... Journal of Open Source Software 9 (100), 7026, 2024 | | 2024 |
Building somatosensory cortex neuron models using a workflow for the creation, validation and generalization of biophysically detailed cell models M Reva, C Roessert, D Mandge, A Arnaudon, T Damart, MA Tuncel, ... Journal Of Computational Neuroscience 49 (1), S122-S123, 2021 | | 2021 |