A comprehensive benchmark of kernel methods to extract protein–protein interactions from literature D Tikk, P Thomas, P Palaga, J Hakenberg, U Leser PLoS computational biology 6 (7), e1000837, 2010 | 223 | 2010 |
Ras-mediated deregulation of the circadian clock in cancer A Relogio, P Thomas, P Medina-Perez, S Reischl, S Bervoets, E Gloc, ... PLoS genetics 10 (5), e1004338, 2014 | 180 | 2014 |
GeneView: a comprehensive semantic search engine for PubMed P Thomas, J Starlinger, A Vowinkel, S Arzt, U Leser Nucleic acids research 40 (W1), W585-W591, 2012 | 104 | 2012 |
BioCreative III interactive task: an overview C Arighi, P Roberts, S Agarwal, S Bhattacharya, G Cesareni, ... BMC Bioinformatics 12 (Suppl 8), S4, 2011 | 103 | 2011 |
Relation Extraction for Drug-Drug Interactions using Ensemble Learning P Thomas, M Neves, I Solt, D Tikk, U Leser DDIExtraction2011: First Challenge Task: Drug-Drug Interaction Extraction at …, 2011 | 86 | 2011 |
WBI-DDI: Drug-Drug Interaction Extraction using Majority Voting P Thomas, M Neves, T Rocktäschel, U Leser, U den Linden SemEval, 2013 | 81 | 2013 |
Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers P Thomas, R Klinger, L Furlong, M Hofmann-Apitius, C Friedrich BMC Bioinformatics 12 (Suppl 4), S4, 2011 | 67 | 2011 |
Findings of the WMT 2017 biomedical translation shared task AJ Yepes, A Névéol, M Neves, K Verspoor, O Bojar, A Boyer, C Grozea, ... Proceedings of the Second Conference on Machine Translation, 234-247, 2017 | 52 | 2017 |
SETH detects and normalizes genetic variants in text P Thomas, T Rocktäschel, J Hakenberg, Y Lichtblau, U Leser Bioinformatics 32 (18), 2883-2885, 2016 | 42 | 2016 |
A detailed error analysis of 13 kernel methods for protein-protein interaction extraction D Tikk, I Solt, P Thomas, U Leser BMC bioinformatics 14, 1-20, 2013 | 42 | 2013 |
Assembly of a comprehensive regulatory network for the mammalian circadian clock: a bioinformatics approach R Lehmann, L Childs, P Thomas, M Abreu, L Fuhr, H Herzel, U Leser, ... PloS one 10 (5), e0126283, 2015 | 39 | 2015 |
Findings of the WMT 2020 biomedical translation shared task: Basque, Italian and Russian as new additional languages R Bawden, GM Di Nunzio, C Grozea, IJ Unanue, AJ Yepes, N Mah, ... Proceedings of the Fifth Conference on Machine Translation, 660-687, 2020 | 38 | 2020 |
Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein Interactions T Bobic, R Klinger, P Thomas, M Hofmann-Apitius, S Birlinghoven, ... ROBUS-UNSUP 2012: Joint Workshop on Unsupervised and Semi-Supervised …, 2012 | 35 | 2012 |
Classical Hodgkin lymphoma shows epigenetic features of an abortive plasma cellular differentiation V Seitz, PE Thomas, K Zimmermann, U Paul, A Ehlers, M Joosten, ... Haematologica, haematol. 2010.031138 v1, 2011 | 31 | 2011 |
Not all links are equal: exploiting dependency types for the extraction of protein-protein interactions from text P Thomas, S Pietschmann, I Solt, D Tikk, U Leser BioNLP 2011 Workshop, 2011, 1, 2011 | 27 | 2011 |
Integrating 400 million variants from 80,000 human samples with extensive annotations: towards a knowledge base to analyze disease cohorts J Hakenberg, WY Cheng, P Thomas, YC Wang, AV Uzilov, R Chen BMC bioinformatics 17, 1-13, 2016 | 25 | 2016 |
Clickbait identification using neural networks P Thomas arXiv preprint arXiv:1710.08721, 2017 | 24 | 2017 |
Twitter Geolocation Prediction Using Neural Networks P Thomas, L Hennig International Conference of the German Society for Computational Linguistics …, 2017 | 24 | 2017 |
Learning protein–protein interaction extraction using distant supervision P Thomas, I Solt, R Klinger, U Leser Proceedings of Workshop on Robust Unsupervised and Semisupervised Methods in …, 2011 | 23 | 2011 |
A german corpus for fine-grained named entity recognition and relation extraction of traffic and industry events M Schiersch, V Mironova, M Schmitt, P Thomas, A Gabryszak, L Hennig Language Resources and Evaluation. International Conference on Language …, 2018 | 22 | 2018 |