Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 2674, 2019 | 286 | 2019 |
Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction in realistic settings R Celebi, H Uyar, E Yasar, O Gumus, O Dikenelli, M Dumontier BMC bioinformatics 20, 1-14, 2019 | 85 | 2019 |
In-silico Prediction of Synergistic Anti-Cancer Drug Combinations Using Multi-omics Data R Celebi, O Bear Don’t Walk, R Movva, S Alpsoy, M Dumontier Scientific Reports 9 (1), 2019 | 84 | 2019 |
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ... Clinical and translational science 15 (8), 1848-1855, 2022 | 51 | 2022 |
Progress toward a universal biomedical data translator K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ... Clinical and Translational Science 15 (8), 1838-1847, 2022 | 19 | 2022 |
Towards FAIR protocols and workflows: the OpenPREDICT use case R Celebi, JR Moreira, AA Hassan, S Ayyar, L Ridder, T Kuhn, ... PeerJ computer science 6, e281, 2020 | 18 | 2020 |
Evaluation of Knowledge Graph Embedding Approaches for Drug-Drug Interaction Prediction using Linked Open Data R Celebi, E Yasar, H Uyar, O Gumus, O Dikenelli, M Dumontier Semantic Web Applications and Tools for Healthcare and Life Sciences, 2018 | 16 | 2018 |
Prediction of Drug-Drug Interactions Using Pharmacological Similarities of Drugs R Çelebi, V Mostafapour, E Yaşar, Ö Gümüş, O Dikenelli 6th International Workshop on Biological Knowledge Discovery and Data Mining …, 2015 | 13 | 2015 |
User-friendly composition of FAIR workflows in a notebook environment RA Richardson, R Celebi, S Van Der Burg, D Smits, L Ridder, ... Proceedings of the 11th Knowledge Capture Conference, 1-8, 2021 | 11 | 2021 |
Using linked open data to bootstrap corporate knowledge management in the organik project G Aastrand, R Celebi, L Sauermann Proceedings of the 6th International Conference on Semantic Systems, 1-8, 2010 | 8 | 2010 |
4th, Movva R, Alpsoy S, Dumontier M. In-silico Prediction of Synergistic Anti-Cancer Drug Combinations Using Multi-omics Data R Celebi, O Bear Don’t Walk Sci Rep 9 (1), 8949, 2019 | 6 | 2019 |
Fact Validation with Knowledge Graph Embeddings A Ammar, R Celebi The 18th International Semantic Web Conference, 2019 | 6 | 2019 |
Relation extraction from DailyMed structured product labels by optimally combining crowd, experts and machines K Shingjergji, R Celebi, J Scholtes, M Dumontier Journal of Biomedical Informatics 122, 103902, 2021 | 5 | 2021 |
Use of open linked data in bioinformatics space: A case study R Çelebi, Ö Gümüş, YA Son 2013 8th International Symposium on Health Informatics and Bioinformatics, 1-5, 2013 | 5 | 2013 |
Process matchmaking on a p2p environment R Celebi, H Ellezer, C Baylam, I Cereci, H Kilic 2006 IEEE/WIC/ACM International Conference on Web Intelligence and …, 2006 | 5 | 2006 |
Semantic Answer Type Prediction by Using BERT classifier and Rule-based Ranking Strategies X Ning, A Ammar, A Yilmaz, S Mehryar, R Celebi SeMantic Answer Type and Relation Prediction Task at ISWC 2021 Semantic Web …, 2022 | 4 | 2022 |
Automated Identification of Food Substitutions Using Knowledge Graph Embeddings. J Loesch, L Meeckers, I van Lier, A de Boer, M Dumontier, R Celebi SWAT4HCLS, 19-28, 2022 | 4 | 2022 |
Towards FAIR protocols and workflows: The OpenPREDICT case study R Celebi, JR Moreira, AA Hassan, S Ayyar, L Ridder, T Kuhn, ... arXiv preprint arXiv:1911.09531, 2019 | 3 | 2019 |
Machine Learning based Drug Indication Prediction using Linked Open Data R Celebi, O Erten, M Dumontier 10th International Conference on Semantic Web Applications and Tools for …, 2017 | 3 | 2017 |
Knowledge base construction from pre-trained language models by prompt learning X Ning, R Celebi 2022 Semantic Web Challenge on Knowledge Base Construction from Pre-Trained …, 2022 | 2 | 2022 |