SAR11 bacteria linked to ocean anoxia and nitrogen loss D Tsementzi, J Wu, S Deutsch, S Nath, LM Rodriguez-R, AS Burns, ... Nature 536 (7615), 179-183, 2016 | 157 | 2016 |
NC10 bacteria in marine oxygen minimum zones CC Padilla, LA Bristow, N Sarode, E Garcia-Robledo, E Gómez Ramírez, ... The ISME Journal 10 (8), 2067-2071, 2016 | 138 | 2016 |
Cryptic oxygen cycling in anoxic marine zones E Garcia-Robledo, CC Padilla, M Aldunate, FJ Stewart, O Ulloa, ... Proceedings of the National Academy of Sciences 114 (31), 8319-8324, 2017 | 133 | 2017 |
Cyanate and urea are substrates for nitrification by Thaumarchaeota in the marine environment K Kitzinger, CC Padilla, HK Marchant, PF Hach, CW Herbold, AT Kidane, ... Nature microbiology 4 (2), 234-243, 2019 | 127 | 2019 |
Single cell analyses reveal contrasting life strategies of the two main nitrifiers in the ocean K Kitzinger, HK Marchant, LA Bristow, CW Herbold, CC Padilla, ... Nature Communications 11 (1), 767, 2020 | 76 | 2020 |
Standard filtration practices may significantly distort planktonic microbial diversity estimates CC Padilla, S Ganesh, S Gantt, A Huhman, DJ Parris, N Sarode, ... Frontiers in Microbiology 6, 547, 2015 | 69 | 2015 |
Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria S Ganesh, AD Bertagnolli, LA Bristow, CC Padilla, N Blackwood, ... The ISME journal 12 (11), 2706-2722, 2018 | 57 | 2018 |
Metagenomic binning recovers a transcriptionally active gammaproteobacterium linking methanotrophy to partial denitrification in an anoxic oxygen minimum zone CC Padilla, AD Bertagnolli, LA Bristow, N Sarode, JB Glass, B Thamdrup, ... Frontiers in Marine Science 4, 23, 2017 | 56 | 2017 |
Metabolic potential and in situ activity of marine Marinimicrobia bacteria in an anoxic water column AD Bertagnolli, CC Padilla, JB Glass, B Thamdrup, FJ Stewart Environmental microbiology 19 (11), 4392-4416, 2017 | 54 | 2017 |
Anaerobic methane oxidation is an important sink for methane in the ocean's largest oxygen minimum zone B Thamdrup, HGR Steinsdóttir, AD Bertagnolli, CC Padilla, NV Patin, ... Limnology and Oceanography 64 (6), 2569-2585, 2019 | 48 | 2019 |
Putative archaeal viruses from the mesopelagic ocean DR Vik, S Roux, JR Brum, B Bolduc, JB Emerson, CC Padilla, FJ Stewart, ... PeerJ 5, e3428, 2017 | 48 | 2017 |
Piecewise structural equation model (SEM) disentangles the environmental conditions favoring diatom diazotroph associations (DDAs) in the western tropical north Atlantic (WTNA) M Stenegren, C Berg, CC Padilla, SS David, JP Montoya, PL Yager, ... Frontiers in Microbiology 8, 259585, 2017 | 33 | 2017 |
Phylogenetic and structural diversity of aromatically dense pili from environmental metagenomes MS Bray, J Wu, CC Padilla, FJ Stewart, DA Fowle, C Henny, RL Simister, ... Environmental microbiology reports 12 (1), 49-57, 2020 | 18 | 2020 |
Broad phylogenetic diversity associated with nitrogen loss through sulfur oxidation in a large public marine aquarium AS Burns, CC Padilla, ZA Pratte, K Gilde, M Regensburger, E Hall, ... Applied and Environmental Microbiology 84 (20), e01250-18, 2018 | 12 | 2018 |
Standard filtration practices may significantly distort planktonic microbial diversity estimates. Front Microbiol 6: 547 CC Padilla, S Ganesh, S Gantt, A Huhman, DJ Parris, N Sarode, ... | 8 | 2015 |
Single cell analyses reveal contrasting life strategies of the two main nitrifiers in the ocean. Nat Commun 11: 767 K Kitzinger, HK Marchant, LA Bristow, CW Herbold, CC Padilla, ... | 7 | 2020 |
Personalized genome assembly for accurate cancer somatic mutation discovery using tumor-normal paired reference samples C Xiao, Z Chen, W Chen, C Padilla, M Colgan, W Wu, LT Fang, T Liu, ... Genome Biology 23 (1), 237, 2022 | 5 | 2022 |
Personalized genome assembly for accurate cancer somatic mutation discovery using cancer-normal paired reference samples C Xiao, Z Chen, W Chen, C Padilla, LT Fang, T Liu, V Schneider, C Wang, ... bioRxiv, 2021.04. 09.438252, 2021 | 4 | 2021 |
Metabolic analysis of metatranscriptomic data from planktonic communities I Mandric, S Knyazev, C Padilla, F Stewart, II Măndoiu, A Zelikovsky Bioinformatics Research and Applications: 13th International Symposium …, 2017 | 4 | 2017 |
Phylogenetic and structural diversity of aromatically dense pili from environmental metagenomes (vol 12, pg 49, 2020) MS Bray, J Wu, CC Padilla, FJ Stewart, DA Fowle, C Henny, RL Simister, ... ENVIRONMENTAL MICROBIOLOGY REPORTS 12 (3), 361-361, 2020 | | 2020 |