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Jared Streich
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Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models
MR Garvin, E T. Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ...
Genome biology 21, 1-26, 2020
662020
Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals?
J Streich, J Romero, JGFM Gazolla, D Kainer, A Cliff, ET Prates, JB Brown, ...
Current opinion in biotechnology 61, 217-225, 2020
542020
Quinoa phenotyping methodologies: An international consensus
CS Stanschewski, E Rey, G Fiene, EB Craine, G Wellman, VJ Melino, ...
Plants 10 (9), 1759, 2021
382021
Global diversity of the Brachypodium species complex as a resource for genome-wide association studies demonstrated for agronomic traits in response to climate
PB Wilson, JC Streich, KD Murray, SR Eichten, R Cheng, NC Aitken, ...
Genetics 211 (1), 317-331, 2019
212019
Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ...
Frontiers in plant science 10, 1249, 2019
192019
Genomic Diversity and Climate Adaptation in Brachypodium
P Wilson, J Streich, J Borevitz
Genetics and genomics of Brachypodium, 107-127, 2016
172016
Environmental resource deficit may drive the evolution of intraspecific trait variation in invasive plant populations
S Liu, J Streich, JO Borevitz, KJ Rice, T Li, B Li, KJ Bradford
Oikos 128 (2), 171-184, 2019
132019
Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics
J Lagergren, M Cashman, VGM Vergara, PR Eller, JGFM Gazolla, ...
Phytobiomes Journal 7 (1), 65-77, 2023
72023
Protoplast fusion in Bacillus species produces frequent, unbiased, genome-wide homologous recombination
DP Vasileva, JC Streich, LH Burdick, DM Klingeman, HB Chhetri, ...
Nucleic Acids Research 50 (11), 6211-6223, 2022
62022
Rare inland reindeer lichens at Mima Mounds in southwest Washington State
RJ Smith, R Arvidson, G Bono, B Chipman, A Corkery, J DiMeglio, ...
North American Fungi 7, 1-25, 2012
62012
Quinoa phenotyping methodologies: an international consensus. Plants 10: 1759
CS Stanschewski, E Rey, G Fiene, EB Craine, G Wellman, VJ Melino, ...
52021
Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa
J Lagergren, M Pavicic, HB Chhetri, LM York, D Hyatt, D Kainer, ...
Plant Phenomics 5, 0072, 2023
32023
Extending the Genotype in Brachypodium by Including DNA Methylation Reveals a Joint Contribution with Genetics on Adaptive Traits
SR Eichten, A Srivastava, AJ Reddiex, DR Ganguly, A Heussler, ...
G3: Genes, Genomes, Genetics 10 (5), 1629-1637, 2020
32020
Population structure of the Brachypodium species complex and genome wide association of agronomic traits in response to climate
P Wilson, J Streich, K Murray, S Eichten, R Cheng, N Aitkin, K Spokas, ...
BioRxiv, 246074, 2018
32018
Using iterative random forest to find geospatial environmental and Sociodemographic predictors of suicide attempts
M Pavicic, AM Walker, KA Sullivan, J Lagergren, A Cliff, J Romero, ...
Frontiers in psychiatry 14, 1178633, 2023
22023
Few-shot leaf segmentation
J Lagergren, M Pavicic, HB Chhetri, LM York, D Hyatt, D Kainer, ...
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2023
12023
Supporting information for" Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"
J Lagergren, M Pavicic, H Chhetri, L York, D Hyatt, D Kainer, EM Rutter, ...
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2023
12023
Using explainable-AI to find geospatial environmental and sociodemographic predictors of suicide attempts
M Pavicic, AM Walker, KA Sullivan, J Lagergren, A Cliff, J Romero, ...
medRxiv, 2022.04. 26.22274333, 2022
12022
Supporting data for climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics
J Lagergren, M Cashman, V Melesse Vergara, P Eller, J Gazolla, ...
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2021
12021
Contributions of Within-Population Trait Variation to Brachypodium hybridum Invasions in California and of Population-based Functional Traits to Germination …
S Liu
University of California, Davis, 2016
12016
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