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Mostofa Rafid Uddin
Mostofa Rafid Uddin
CBD, School of Computer Science, Carnegie Mellon University
在 cs.cmu.edu 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
SAINT: Self-Attention Augmented Inception-Inside-Inception Network Improves Protein Secondary Structure Prediction
MR Uddin, S Mahbub, MS Rahman, MS Bayzid
Bioinformatics, 2020
612020
Immune landscape in invasive ductal and lobular breast cancer reveals a divergent macrophage-driven microenvironment
S Onkar, J Cui, J Zou, C Cardello, AR Cillo, MR Uddin, A Sagan, M Joy, ...
Nature Cancer 4 (4), 516-534, 2023
192023
Harmony: A Generic Unsupervised Approach for Disentangling Semantic Content from Parameterized Transformations
MR Uddin, G Howe, X Zeng, M Xu
IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2022
62022
Computational methods toward unbiased pattern mining and structure determination in cryo-electron tomography data
HHS Kim, MR Uddin, M Xu, YW Chang
Journal of molecular biology 435 (9), 168068, 2023
52023
Self-supervised learning for macromolecular structure classification based on cryo-electron tomograms
T Gupta, X He, MR Uddin, X Zeng, A Zhou, J Zhang, Z Freyberg, M Xu
Frontiers in Physiology 13, 957484, 2022
32022
Cryo-shift: Reducing domain shift in cryo-electron subtomograms with unsupervised domain adaptation and randomization
H Bandyopadhyay, Z Deng, L Ding, S Liu, MR Uddin, X Zeng, S Behpour, ...
Bioinformatics, 2021
32021
Unsupervised multi-task learning for 3D subtomogram image alignment, Clustering and Segmentation
H Zhu, C Wang, Y Wang, Z Fan, MR Uddin, X Gao, J Zhang, X Zeng, M Xu
2022 IEEE International Conference on Image Processing (ICIP), 2751-2755, 2022
22022
Deep active learning for cryo-electron tomography classification
T Wang, B Li, J Zhang, X Zeng, MR Uddin, W Wu, M Xu
2022 IEEE International Conference on Image Processing (ICIP), 1611-1615, 2022
22022
Structure detection in three-dimensional cellular cryoelectron tomograms by reconstructing two-dimensional annotated tilt series
X Zeng, Z Lin, MR Uddin, B Zhou, C Cheng, J Zhang, Z Freyberg, M Xu
Journal of Computational Biology 29 (8), 932-941, 2022
12022
Practical analysis of macromolecule identity from cryo-electron tomography images using deep learning
MR Uddin, AY Ahmed, K Khan, MS Fatemi, X Zeng, M Xu
2021 IEEE applied imagery pattern recognition workshop (AIPR), 1-9, 2021
12021
DualContrast: Unsupervised Disentangling of Content and Transformations with Implicit Parameterization
MR Uddin, M Xu
arXiv preprint arXiv:2405.16796, 2024
2024
DUAL: deep unsupervised simultaneous simulation and denoising for cryo-electron tomography
X Zeng, Y Ding, Y Zhang, MR Uddin, A Dabouei, M Xu
bioRxiv, 2024
2024
Detecting anomalies from liquid transfer videos in automated laboratory setting
NH Sarker, ZA Hakim, A Dabouei, MR Uddin, Z Freyberg, A MacWilliams, ...
Frontiers in Molecular Biosciences 10, 1147514, 2023
2023
Immune landscape in estrogen receptor positive breast cancer reveals a divergent macrophage-driven microenvironment
S Onkar, J Cui, J Zou, C Cardello, AR Cillo, MR Uddin, A Sagan, M Joy, ...
Nature cancer 4 (4), 516, 2023
2023
Immune landscape in invasive ductal and lobular breast cancer reveals a divergent macrophage-driven microenvironment (Mar, 10.1038/s43018-023-00527-w, 2023)
S Onkar, J Cui, J Zou, C Cardello, AR Cillo, MR Uddin, A Sagan, M Joy, ...
NATURE CANCER 4 (4), 582-582, 2023
2023
Supplementary of Harmony: A Generic Unsupervised Approach for Disentangling Semantic Content from Parameterized Transformations
MR Uddin, G Howe, X Zeng, M Xu
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