Robust Demographic Inference from Genomic and SNP Data L Excoffier, I Dupanloup, E Huerta-Sánchez, VC Sousa, M Foll PLOS Genetics 9 (10), e1003905, 2013 | 1395 | 2013 |
A genomic history of Aboriginal Australia AS Malaspinas, MC Westaway, C Muller, VC Sousa, O Lao, I Alves, ... Nature 538 (7624), 207-214, 2016 | 606 | 2016 |
The population history of northeastern Siberia since the Pleistocene M Sikora, VV Pitulko, VC Sousa, ME Allentoft, L Vinner, S Rasmussen, ... Nature 570 (7760), 182-188, 2019 | 363 | 2019 |
Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers M Sikora, A Seguin-Orlando, VC Sousa, A Albrechtsen, T Korneliussen, ... Science 358 (6363), 659-662, 2017 | 341 | 2017 |
The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes L Chikhi, VC Sousa, P Luisi, B Goossens, MA Beaumont Genetics 186 (3), 983-995, 2010 | 331 | 2010 |
Understanding the origin of species with genome-scale data: modelling gene flow V Sousa, J Hey Nature Reviews Genetics 14 (6), 404-414, 2013 | 325 | 2013 |
Chimpanzee genomic diversity reveals ancient admixture with bonobos M de Manuel, M Kuhlwilm, P Frandsen, VC Sousa, T Desai, ... Science 354 (6311), 477-481, 2016 | 317 | 2016 |
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes AD Foote, N Vijay, MC Ávila-Arcos, RW Baird, JW Durban, M Fumagalli, ... Nature communications 7 (1), 11693, 2016 | 280 | 2016 |
fastsimcoal2: demographic inference under complex evolutionary scenarios L Excoffier, N Marchi, DA Marques, R Matthey-Doret, A Gouy, VC Sousa Bioinformatics 37 (24), 4882-4885, 2021 | 222 | 2021 |
Demographic modelling with whole‐genome data reveals parallel origin of similar Pundamilia cichlid species after hybridization JI Meier, VC Sousa, DA Marques, OM Selz, CE Wagner, L Excoffier, ... Molecular ecology 26 (1), 123-141, 2017 | 128 | 2017 |
Phylogeny Estimation by Integration over Isolation with Migration Models J Hey, Y Chung, A Sethuraman, J Lachance, S Tishkoff, VC Sousa, ... Molecular biology and evolution 35 (11), 2805-2818, 2018 | 127 | 2018 |
From genetic diversity and structure to conservation: genetic signature of recent population declines in three mouse lemur species (Microcebus spp.) GL Olivieri, V Sousa, L Chikhi, U Radespiel Biological Conservation 141 (5), 1257-1271, 2008 | 126 | 2008 |
Influence of forest fragmentation on an endangered large-bodied lemur in northwestern Madagascar M Craul, L Chikhi, V Sousa, GL Olivieri, A Rabesandratana, ... Biological conservation 142 (12), 2862-2871, 2009 | 107 | 2009 |
Approximate Bayesian computation without summary statistics: the case of admixture VC Sousa, M Fritz, MA Beaumont, L Chikhi Genetics 181 (4), 1507-1519, 2009 | 90 | 2009 |
The evolutionary history of Nebraska deer mice: local adaptation in the face of strong gene flow SP Pfeifer, S Laurent, VC Sousa, CR Linnen, M Foll, L Excoffier, ... Molecular biology and evolution 35 (4), 792-806, 2018 | 88 | 2018 |
Ancient admixture from an extinct ape lineage into bonobos M Kuhlwilm, S Han, VC Sousa, L Excoffier, T Marques-Bonet Nature ecology & evolution 3 (6), 957-965, 2019 | 78 | 2019 |
The population genomics of rapid adaptation: disentangling signatures of selection and demography in white sands lizards S Laurent, SP Pfeifer, ML Settles, SS Hunter, KM Hardwick, L Ormond, ... Molecular ecology 25 (1), 306-323, 2016 | 68 | 2016 |
Identifying Loci Under Selection Against Gene Flow in Isolation-with-Migration Models VC Sousa, M Carneiro, N Ferrand, J Hey Genetics 194 (1), 211-233, 2013 | 68 | 2013 |
The genomic history of the Aegean palatial civilizations F Clemente, M Unterländer, O Dolgova, CEG Amorim, F Coroado-Santos, ... Cell 184 (10), 2565-2586. e21, 2021 | 65 | 2021 |
Investigating sex-biased migration during the Neolithic transition in Europe, using an explicit spatial simulation framework R Rasteiro, PA Bouttier, VC Sousa, L Chikhi Proceedings of the Royal Society B: Biological Sciences 279 (1737), 2409-2416, 2012 | 62 | 2012 |