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Sridip Parui
Sridip Parui
State University of New York at Stony Brook
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Ionic liquid induced dehydration and domain closure in lysozyme: FCS and MD simulation
S Ghosh, S Parui, B Jana, K Bhattacharyya
The Journal of Chemical Physics 143 (12), 2015
412015
Interaction of proteins with ionic liquid, alcohol and DMSO and in situ generation of gold nano-clusters in a cell
S Nandi, S Parui, R Halder, B Jana, K Bhattacharyya
Biophysical reviews 10, 757-768, 2018
332018
Factors promoting the formation of clathrate-like ordering of water in biomolecular structure at ambient temperature and pressure
S Parui, B Jana
The Journal of Physical Chemistry B 123 (4), 811-824, 2019
232019
Destabilization of hydrophobic core of chicken villin headpiece in guanidinium chloride induced denaturation: hint of π-cation interaction
S Parui, RN Manna, B Jana
The Journal of Physical Chemistry B 120 (36), 9599-9607, 2016
212016
Pairwise hydrophobicity at low temperature: appearance of a stable second solvent-separated minimum with possible implication in cold denaturation
S Parui, B Jana
The Journal of Physical Chemistry B 121 (29), 7016-7026, 2017
192017
Molecular insights into the unusual structure of an antifreeze protein with a hydrated core
S Parui, B Jana
The Journal of Physical Chemistry B 122 (43), 9827-9839, 2018
152018
Local environment of organic dyes in an ionic liquid-water mixture: FCS and MD simulation
S Nandi, S Parui, B Jana, K Bhattacharyya
The Journal of Chemical Physics 149 (5), 2018
152018
Accelerating protein folding molecular dynamics using inter-residue distances from machine learning servers
R Nassar, E Brini, S Parui, C Liu, GL Dignon, KA Dill
Journal of Chemical Theory and Computation 18 (3), 1929-1935, 2022
122022
Relative solvent exposure of the alpha-helix and beta-sheet in water determines the initial stages of urea and guanidinium chloride-induced denaturation of alpha/beta proteins
S Parui, B Jana
The Journal of Physical Chemistry B 123 (42), 8889-8900, 2019
122019
Cold Denaturation Induced Helix-to-Helix Transition and its Implication to Activity of Helical Antifreeze Protein
S Parui, B Jana
Journal of Molecular Liquids, 2021
82021
MELD-Bracket Ranks Binding Affinities of Diverse Sets of Ligands
S Parui, JC Robertson, S Somani, G Tresadern, C Liu, KA Dill
Journal of Chemical Information and Modeling 63 (9), 2857-2865, 2023
12023
Computing Free Energies of Fold-Switching Proteins Using MELD x MD
S Parui, E Brini, KA Dill
Journal of Chemical Theory and Computation 19 (19), 6839-6847, 2023
2023
Exploring the consequence of low temparature pair hydrophobicity on protein structure and the mechanism of chemical denaturation of protein
S Parui
Kolkata, 0
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