| Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution A Mayer, J Di Iulio, S Maleri, U Eser, J Vierstra, A Reynolds, R Sandstrom, ... Cell 161 (3), 541-554, 2015 | 377 | 2015 |
| Commitment to a cellular transition precedes genome-wide transcriptional change U Eser, M Falleur-Fettig, A Johnson, JM Skotheim Molecular cell 43 (4), 515-527, 2011 | 112 | 2011 |
| The ground state and evolution of promoter region directionality Y Jin, U Eser, K Struhl, LS Churchman Cell 170 (5), 889-898. e10, 2017 | 89 | 2017 |
| Form and function of topologically associating genomic domains in budding yeast U Eser, D Chandler-Brown, F Ay, AF Straight, Z Duan, WS Noble, ... Proceedings of the National Academy of Sciences 114 (15), E3061-E3070, 2017 | 80 | 2017 |
| Nuclear repulsion enables division autonomy in a single cytoplasm CA Anderson, U Eser, T Korndorf, ME Borsuk, JM Skotheim, AS Gladfelter Current Biology 23 (20), 1999-2010, 2013 | 68 | 2013 |
| An algorithm to automate yeast segmentation and tracking A Doncic, U Eser, O Atay, JM Skotheim PLoS one 8 (3), e57970, 2013 | 68 | 2013 |
| Set2 methyltransferase facilitates cell cycle progression by maintaining transcriptional fidelity R Dronamraju, DK Jha, U Eser, AT Adams, D Dominguez, R Choudhury, ... Nucleic acids research 46 (3), 1331-1344, 2018 | 33 | 2018 |
| Cellular identity at the single-cell level AF Coskun, U Eser, S Islam Molecular BioSystems 12 (10), 2965-2979, 2016 | 25 | 2016 |
| Machine learning enabled pulse and base calling for sequencing devices JM Rothberg, M Meyer, U Eser US Patent 11,538,556, 2022 | 22 | 2022 |
| FIDDLE: An integrative deep learning framework for functional genomic data inference U Eser, LS Churchman Biorxiv, 081380, 2016 | 22 | 2016 |
| Systems and methods for unifying statistical models for different data modalities JM Rothberg, U Eser, M Meyer US Patent 10,956,787, 2021 | 16 | 2021 |
| Systems and methods for unifying statistical models for different data modalities JM Rothberg, U Eser, M Meyer US Patent 11,494,589, 2022 | 3 | 2022 |
| Systems and methods for unifying statistical models for different data modalities JM Rothberg, U Eser, M Meyer US Patent 11,875,267, 2024 | 2 | 2024 |
| Molecule design U Eser, FA Wolf, NMC Plugis US Patent App. 17/792,639, 2023 | 1 | 2023 |
| Systems and methods for associating compounds with properties using clique analysis of cell-based data FA Wolf, U Eser, NMC Plugis US Patent 11,978,538, 2024 | | 2024 |
| Methods and apparatus for multi-modal prediction using a trained statistical model U Eser, M Meyer US Patent 11,971,963, 2024 | | 2024 |
| Methods and apparatus for making biological predictions using a trained multi-modal statistical model M Hernandez, U Eser, M Meyer, H Lichenstein, T Xu, JM Rothberg US Patent 11,967,436, 2024 | | 2024 |
| Machine learning enabled pulse and base calling for sequencing devices JM Rothberg, M Meyer, U Eser US Patent App. 18/082,487, 2023 | | 2023 |
| Systems and methods for associating compounds with physiological conditions using fingerprint analysis FA Wolf, U Eser, NMC Plugis US Patent App. 17/841,543, 2022 | | 2022 |
| sistemas e métodos para unificar modelos estatísticos para diferentes modalidades de dados JM Rothberg, U Eser, M Meyer | | 2021 |
