Toxins, targets, and triggers: an overview of toxin-antitoxin biology A Harms, DE Brodersen, N Mitarai, K Gerdes Molecular cell 70 (5), 768-784, 2018 | 580 | 2018 |
Wet granular materials N Mitarai, F Nori Advances in physics 55 (1-2), 1-45, 2006 | 572 | 2006 |
Ribosome collisions and translation efficiency: optimization by codon usage and mRNA destabilization N Mitarai, K Sneppen, S Pedersen Journal of molecular biology 382 (1), 236-245, 2008 | 187 | 2008 |
Collisional granular flow as a micropolar fluid N Mitarai, H Hayakawa, H Nakanishi Physical review letters 88 (17), 174301, 2002 | 130 | 2002 |
Conditional cooperativity in toxin–antitoxin regulation prevents random toxin activation and promotes fast translational recovery I Cataudella, A Trusina, K Sneppen, K Gerdes, N Mitarai Nucleic acids research 40 (14), 6424-6434, 2012 | 110 | 2012 |
Bagnold scaling, density plateau, and kinetic theory analysis of dense granular flow N Mitarai, H Nakanishi Physical review letters 94 (12), 128001, 2005 | 104 | 2005 |
Spatiotemporal structure of traffic flow in a system with an open boundary N Mitarai, H Nakanishi Physical review letters 85 (8), 1766, 2000 | 93 | 2000 |
Efficient degradation and expression prioritization with small RNAs N Mitarai, AMC Andersson, S Krishna, S Semsey, K Sneppen Physical biology 4 (3), 164, 2007 | 91 | 2007 |
Dynamic features of gene expression control by small regulatory RNAs N Mitarai, JAM Benjamin, S Krishna, S Semsey, Z Csiszovszki, E Massé, ... Proceedings of the National Academy of Sciences 106 (26), 10655-10659, 2009 | 89 | 2009 |
Velocity correlations in dense granular shear flows: Effects on energy dissipation and normal stress N Mitarai, H Nakanishi Physical Review E 75 (3), 031305, 2007 | 89 | 2007 |
Conditional cooperativity of toxin-antitoxin regulation can mediate bistability between growth and dormancy I Cataudella, K Sneppen, K Gerdes, N Mitarai PLoS computational biology 9 (8), e1003174, 2013 | 78 | 2013 |
A growing microcolony can survive and support persistent propagation of virulent phages RS Eriksen, SL Svenningsen, K Sneppen, N Mitarai Proceedings of the National Academy of Sciences 115 (2), 337-342, 2018 | 76 | 2018 |
Birth and resuscitation of (p) ppGpp induced antibiotic tolerant persister cells MS Svenningsen, A Veress, A Harms, N Mitarai, S Semsey Scientific Reports 9 (1), 6056, 2019 | 73 | 2019 |
Fluid dynamics of dilatant fluids H Nakanishi, S Nagahiro, N Mitarai Physical Review E 85 (1), 011401, 2012 | 65 | 2012 |
Phage and bacteria support mutual diversity in a narrowing staircase of coexistence JO Haerter, N Mitarai, K Sneppen The ISME journal 8 (11), 2317-2326, 2014 | 61 | 2014 |
Theory for the stability and regulation of epigenetic landscapes MA Micheelsen, N Mitarai, K Sneppen, IB Dodd Physical biology 7 (2), 026010, 2010 | 61 | 2010 |
The generation of promoter-mediated transcriptional noise in bacteria N Mitarai, IB Dodd, MT Crooks, K Sneppen PLoS computational biology 4 (7), e1000109, 2008 | 60 | 2008 |
Ecosystems with mutually exclusive interactions self-organize to a state of high diversity J Mathiesen, N Mitarai, K Sneppen, A Trusina Physical review letters 107 (18), 188101, 2011 | 59 | 2011 |
Population dynamics of phage and bacteria in spatially structured habitats using phage λ and Escherichia coli N Mitarai, S Brown, K Sneppen Journal of bacteriology 198 (12), 1783-1793, 2016 | 47 | 2016 |
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region M Pedersen, S Nissen, N Mitarai, SL Svenningsen, K Sneppen, ... Journal of molecular biology 407 (1), 35-44, 2011 | 42 | 2011 |