| Mapping the Arabidopsis organelle proteome TPJ Dunkley, S Hester, IP Shadforth, J Runions, T Weimar, SL Hanton, ... Proceedings of the National Academy of Sciences 103 (17), 6518-6523, 2006 | 619 | 2006 |
| Localization of organelle proteins by isotope tagging (LOPIT) TPJ Dunkley, R Watson, JL Griffin, P Dupree, KS Lilley Molecular & Cellular Proteomics 3 (11), 1128-1134, 2004 | 415 | 2004 |
| i-Tracker: For quantitative proteomics using iTRAQ™ IP Shadforth, TPJ Dunkley, KS Lilley, C Bessant BMC genomics 6, 1-6, 2005 | 354 | 2005 |
| A systematic approach to modeling, capturing, and disseminating proteomics experimental data CF Taylor, NW Paton, KL Garwood, PD Kirby, DA Stead, Z Yin, ... Nature biotechnology 21 (3), 247-254, 2003 | 315 | 2003 |
| Growth control of the eukaryote cell: a systems biology study in yeast JI Castrillo, LA Zeef, DC Hoyle, N Zhang, A Hayes, DCJ Gardner, ... Journal of biology 6, 1-25, 2007 | 301 | 2007 |
| Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics N Nikolovski, D Rubtsov, MP Segura, GP Miles, TJ Stevens, TPJ Dunkley, ... Plant physiology 160 (2), 1037-1051, 2012 | 193 | 2012 |
| MSstatsTMT: statistical detection of differentially abundant proteins in experiments with isobaric labeling and multiple mixtures T Huang, M Choi, M Tzouros, S Golling, NJ Pandya, B Banfai, T Dunkley, ... Molecular & Cellular Proteomics 19 (10), 1706-1723, 2020 | 119 | 2020 |
| mTORC1 inhibition corrects neurodevelopmental and synaptic alterations in a human stem cell model of tuberous sclerosis V Costa, S Aigner, M Vukcevic, E Sauter, K Behr, M Ebeling, T Dunkley, ... Cell reports 15 (1), 86-95, 2016 | 117 | 2016 |
| Quantitative proteomic approach to study subcellular localization of membrane proteins PG Sadowski, TPJ Dunkley, IP Shadforth, P Dupree, C Bessant, JL Griffin, ... Nature protocols 1 (4), 1778-1789, 2006 | 109 | 2006 |
| Targeted profiling of polar intracellular metabolites using ion-pair-high performance liquid chromatography and-ultra high performance liquid chromatography coupled to tandem … F Michopoulos, N Whalley, G Theodoridis, ID Wilson, TPJ Dunkley, ... Journal of Chromatography A 1349, 60-68, 2014 | 107 | 2014 |
| AZD3514: A Small Molecule That Modulates Androgen Receptor Signaling and Function In Vitro and In Vivo SA Loddick, SJ Ross, AG Thomason, DM Robinson, GE Walker, ... Molecular cancer therapeutics 12 (9), 1715-1727, 2013 | 86 | 2013 |
| The use of isotope-coded affinity tags (ICAT) to study organelle proteomes in Arabidopsis thaliana TPJ Dunkley, P Dupree, RB Watson, KS Lilley Biochemical Society Transactions 32 (3), 520-523, 2004 | 78 | 2004 |
| MassIVE. quant: a community resource of quantitative mass spectrometry–based proteomics datasets M Choi, J Carver, C Chiva, M Tzouros, T Huang, TH Tsai, B Pullman, ... Nature methods 17 (10), 981-984, 2020 | 73 | 2020 |
| Improved sub‐cellular resolution via simultaneous analysis of organelle proteomics data across varied experimental conditions MWB Trotter, PG Sadowski, TPJ Dunkley, AJ Groen, KS Lilley Proteomics 10 (23), 4213-4219, 2010 | 58 | 2010 |
| Quantitative ADME proteomics–CYP and UGT enzymes in the beagle dog liver and intestine AT Heikkinen, A Friedlein, M Matondo, OJD Hatley, A Petsalo, R Juvonen, ... Pharmaceutical research 32, 74-90, 2015 | 54 | 2015 |
| Proteomics sample preparation J von Hagen John Wiley & Sons, 2008 | 49 | 2008 |
| N-Terminomics identifies HtrA1 cleavage of thrombospondin-1 with generation of a proangiogenic fragment in the polarized retinal pigment epithelial cell model of age-related … C Chen, E Melo, P Jakob, A Friedlein, B Elsässer, P Goettig, V Kueppers, ... Matrix Biology 70, 84-101, 2018 | 42 | 2018 |
| Confident protein identification using the average peptide score method coupled with search‐specific, ab initio thresholds I Shadforth, T Dunkley, K Lilley, D Crowther, C Bessant Rapid Communications in Mass Spectrometry: An International Journal Devoted …, 2005 | 37 | 2005 |
| Secreted retrovirus-like GAG-domain-containing protein PEG10 is regulated by UBE3A and is involved in Angelman syndrome pathophysiology NJ Pandya, C Wang, V Costa, P Lopatta, S Meier, FI Zampeta, AM Punt, ... Cell Reports Medicine 2 (8), 2021 | 35 | 2021 |
| Selection of features with consistent profiles improves relative protein quantification in mass spectrometry experiments TH Tsai, M Choi, B Banfai, Y Liu, BX MacLean, T Dunkley, O Vitek Molecular & Cellular Proteomics 19 (6), 944-959, 2020 | 31 | 2020 |
