Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 917 | 2016 |
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 588 | 2019 |
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 482 | 2020 |
Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 469 | 2019 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 409 | 2021 |
Updates to the symbol nomenclature for glycans guidelines S Neelamegham, K Aoki-Kinoshita, E Bolton, M Frank, F Lisacek, ... Glycobiology 29 (9), 620-624, 2019 | 369 | 2019 |
The CPTAC data portal: a resource for cancer proteomics research NJ Edwards, M Oberti, RR Thangudu, S Cai, PB McGarvey, S Jacob, ... Journal of proteome research 14 (6), 2707-2713, 2015 | 366 | 2015 |
Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 341 | 2020 |
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 330 | 2020 |
Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 291 | 2021 |
Whole-genome shotgun assembly and comparison of human genome assemblies S Istrail, GG Sutton, L Florea, AL Halpern, CM Mobarry, R Lippert, ... Proceedings of the National Academy of Sciences 101 (7), 1916-1921, 2004 | 274 | 2004 |
SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database V Bafna, N Edwards Bioinformatics 17 (suppl_1), S13-S21, 2001 | 269 | 2001 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 229 | 2021 |
Integrated proteogenomic characterization across major histological types of pediatric brain cancer F Petralia, N Tignor, B Reva, M Koptyra, S Chowdhury, D Rykunov, A Krek, ... Cell 183 (7), 1962-1985. e31, 2020 | 214 | 2020 |
A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 210 | 2021 |
Deconvolution and database search of complex tandem mass spectra of intact proteins X Liu, Y Inbar, PC Dorrestein, C Wynne, N Edwards, P Souda, ... Molecular & Cellular Proteomics 9 (12), 2772-2782, 2010 | 189 | 2010 |
A unique Mycobacterium ESX‐1 protein co‐secretes with CFP‐10/ESAT‐6 and is necessary for inhibiting phagosome maturation J Xu, O Laine, M Masciocchi, J Manoranjan, J Smith, SJ Du, N Edwards, ... Molecular microbiology 66 (3), 787-800, 2007 | 172 | 2007 |
Exosomes from myeloid-derived suppressor cells carry biologically active proteins M Burke, W Choksawangkarn, N Edwards, S Ostrand-Rosenberg, ... Journal of proteome research 13 (2), 836-843, 2014 | 158 | 2014 |
GlyGen: computational and informatics resources for glycoscience WS York, R Mazumder, R Ranzinger, N Edwards, R Kahsay, ... Glycobiology 30 (2), 72-73, 2020 | 149 | 2020 |
A survey of computational methods for determining haplotypes BV Halldórsson, V Bafna, N Edwards, R Lippert, S Yooseph, S Istrail RECOMB Workshop on Computational Methods for SNPs and Haplotype Inference, 26-47, 2002 | 138 | 2002 |