| Dual role of FoxA1 in androgen receptor binding to chromatin, androgen signalling and prostate cancer B Sahu, M Laakso, K Ovaska, T Mirtti, J Lundin, A Rannikko, A Sankila, ... The EMBO journal 30 (19), 3962-3976, 2011 | 421 | 2011 |
| Integrated network analysis platform for protein-protein interactions J Wu, T Vallenius, K Ovaska, J Westermarck, TP Mäkelä, S Hautaniemi Nature methods 6 (1), 75-77, 2009 | 361 | 2009 |
| FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells B Sahu, M Laakso, P Pihlajamaa, K Ovaska, I Sinielnikov, S Hautaniemi, ... Cancer research 73 (5), 1570-1580, 2013 | 270 | 2013 |
| Large-scale data integration framework provides a comprehensive view on glioblastoma multiforme K Ovaska, M Laakso, S Haapa-Paananen, R Louhimo, P Chen, ... Genome medicine 2, 1-12, 2010 | 229 | 2010 |
| Fast gene ontology based clustering for microarray experiments K Ovaska, M Laakso, S Hautaniemi BioData mining 1, 1-8, 2008 | 136 | 2008 |
| Anduril 2: upgraded large-scale data integration framework A Cervera, V Rantanen, K Ovaska, M Laakso, J Nunez-Fontarnau, ... Bioinformatics 35 (19), 3815-3817, 2019 | 37 | 2019 |
| Transmembrane prostatic acid phosphatase (TMPAP) interacts with snapin and deficient mice develop prostate adenocarcinoma IB Quintero, AM Herrala, CL Araujo, AE Pulkka, S Hautaniemi, K Ovaska, ... PloS one 8 (9), e73072, 2013 | 37 | 2013 |
| Potential role of a navigator gene NAV3 in colorectal cancer E Carlsson, A Ranki, L Sipilä, L Karenko, WM Abdel-Rahman, K Ovaska, ... British journal of cancer 106 (3), 517-524, 2012 | 34 | 2012 |
| Candidate susceptibility variants for esophageal squamous cell carcinoma I Donner, R Katainen, T Tanskanen, E Kaasinen, M Aavikko, K Ovaska, ... Genes, Chromosomes and Cancer 56 (6), 453-459, 2017 | 26 | 2017 |
| Genomic region operation kit for flexible processing of deep sequencing data K Ovaska, L Lyly, B Sahu, OA Janne, S Hautaniemi IEEE/ACM transactions on computational biology and bioinformatics 10 (1 …, 2012 | 25 | 2012 |
| Neuron navigator 3 alterations in nervous system tumors associate with tumor malignancy grade and prognosis E Carlsson, K Krohn, K Ovaska, P Lindberg, V Häyry, P Maliniemi, ... Genes, Chromosomes and Cancer 52 (2), 191-201, 2013 | 24 | 2013 |
| Molecular characterization of subcutaneous panniculitis-like T-cell lymphoma reveals upregulation of immunosuppression-and autoimmunity-associated genes P Maliniemi, S Hahtola, K Ovaska, L Jeskanen, L Väkevä, K Jäntti, ... Orphanet journal of rare diseases 9, 1-15, 2014 | 22 | 2014 |
| Integrative Analysis of Deep Sequencing Data Identifies Estrogen Receptor Early Response Genes and Links ATAD3B to Poor Survival in Breast Cancer K Ovaska, F Matarese, K Grote, I Charapitsa, A Cervera, C Liu, G Reid, ... PLoS computational biology 9 (6), e1003100, 2013 | 17 | 2013 |
| Comprehensive evaluation of coding region point mutations in microsatellite‐unstable colorectal cancer J Kondelin, K Salokas, L Saarinen, K Ovaska, H Rauanheimo, RM Plaketti, ... EMBO molecular medicine 10 (9), e8552, 2018 | 16 | 2018 |
| NAV3 copy number changes and target genes in basal and squamous cell cancers P Maliniemi, E Carlsson, A Kaukola, K Ovaska, K Niiranen, O Saksela, ... Experimental dermatology 20 (11), 926-931, 2011 | 16 | 2011 |
| Transmembrane prostatic acid phosphatase (TMPAP) delays cells in G1 phase of the cell cycle CL Araujo, IB Quintero, K Ovaska, AM Herrala, S Hautaniemi, PT Vihko The Prostate 76 (2), 151-162, 2016 | 7 | 2016 |
| Using semantic similarities and csbl. go for analyzing microarray data K Ovaska Microarray Data Analysis: Methods and Applications, 105-116, 2016 | 3 | 2016 |
| Systematic use of computational methods allows stratification of treatment responders in glioblastoma multiforme R Louhimo, V Aittomäki, A Faisal, M Laakso, P Chen, K Ovaska, E Valo, ... Systems Biomedicine 1 (2), 130-136, 2013 | 2 | 2013 |
| Cervera, A. A Cervera, V Rantanen, K Ovaska, M Laakso, J Nuñez-Fontarnau, ... | 1 | 2019 |
| Component-based workflow framework for gene expression mi-croarray analysis K Ovaska MSc Thesis, 2008 | 1 | 2008 |
Biswajyoti SahuGroup leader, NCMM, University of Oslo | Principal Investigator, University of Helsinki在 helsinki.fi 的电子邮件经过验证
