Loci associated with skin pigmentation identified in African populations NG Crawford, DE Kelly, MEB Hansen, MH Beltrame, S Fan, SL Bowman, ... Science 358 (6365), eaan8433, 2017 | 365 | 2017 |
A fine-scale chimpanzee genetic map from population sequencing A Auton, A Fledel-Alon, S Pfeifer, O Venn, L Ségurel, T Street, EM Leffler, ... Science 336 (6078), 193-198, 2012 | 325 | 2012 |
Multiple instances of ancient balancing selection shared between humans and chimpanzees EM Leffler, Z Gao, S Pfeifer, L Ségurel, A Auton, O Venn, R Bowden, ... Science 339 (6127), 1578-1582, 2013 | 321 | 2013 |
Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors A Goriely, RMS Hansen, IB Taylor, IA Olesen, GK Jacobsen, SJ McGowan, ... Nature genetics 41 (11), 1247-1252, 2009 | 217 | 2009 |
Linking a mutation to survival in wild mice RDH Barrett, S Laurent, R Mallarino, SP Pfeifer, CCY Xu, M Foll, ... Science 363 (6426), 499-504, 2019 | 182 | 2019 |
From next-generation resequencing reads to a high-quality variant data set SP Pfeifer Heredity 118 (2), 111-124, 2017 | 113 | 2017 |
The evolutionary history of Nebraska deer mice: local adaptation in the face of strong gene flow SP Pfeifer, S Laurent, VC Sousa, CR Linnen, M Foll, L Excoffier, ... Molecular biology and evolution 35 (4), 792-806, 2018 | 87 | 2018 |
Contributions of intrinsic mutation rate and selfish selection to levels of de novo HRAS mutations in the paternal germline E Giannoulatou, G McVean, IB Taylor, SJ McGowan, GJ Maher, Z Iqbal, ... Proceedings of the National Academy of Sciences 110 (50), 20152-20157, 2013 | 78 | 2013 |
Recommendations for improving statistical inference in population genomics P Johri, CF Aquadro, M Beaumont, B Charlesworth, L Excoffier, ... PLoS biology 20 (5), e3001669, 2022 | 66 | 2022 |
The population genomics of rapid adaptation: disentangling signatures of selection and demography in white sands lizards S Laurent, SP Pfeifer, ML Settles, SS Hunter, KM Hardwick, L Ormond, ... Molecular ecology 25 (1), 306-323, 2016 | 66 | 2016 |
On the analysis of intrahost and interhost viral populations: human cytomegalovirus as a case study of pitfalls and expectations N Renzette, SP Pfeifer, S Matuszewski, TF Kowalik, JD Jensen Journal of Virology 91 (5), e01976-16, 2017 | 44 | 2017 |
Direct estimate of the spontaneous germ line mutation rate in African green monkeys SP Pfeifer Evolution 71 (12), 2858–2870, 2017 | 43 | 2017 |
The mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates LA Bergeron, S Besenbacher, T Turner, CJ Versoza, RJ Wang, AL Price, ... Elife 11, e73577, 2022 | 41 | 2022 |
Characterizing human cytomegalovirus reinfection in congenitally infected infants: an evolutionary perspective C Pokalyuk, N Renzette, KK Irwin, SP Pfeifer, L Gibson, WJ Britt, ... Molecular Ecology, 2016 | 32 | 2016 |
The ultimate and proximate mechanisms driving the evolution of long tails in forest deer mice EP Kingsley, KM Kozak, SP Pfeifer, DS Yang, HE Hoekstra Evolution 71 (2), 261-273, 2017 | 29 | 2017 |
The population genetics of crypsis in vertebrates: recent insights from mice, hares, and lizards RB Harris, K Irwin, MR Jones, S Laurent, RDH Barrett, MW Nachman, ... Heredity 124 (1), 1-14, 2020 | 28 | 2020 |
The Demographic History of African Drosophila melanogaster A Kapopoulou, SP Pfeifer, JD Jensen, S Laurent Genome biology and evolution 10 (9), 2338-2342, 2018 | 27 | 2018 |
On the Demographic and Selective Forces Shaping Patterns of Human Cytomegalovirus Variation within Hosts AM Sackman, SP Pfeifer, TF Kowalik, JD Jensen Pathogens 7 (1), 16, 2018 | 27 | 2018 |
Inferring the age of a fixed beneficial allele L Ormond, M Foll, GB Ewing, SP Pfeifer, JD Jensen Molecular ecology 25 (1), 157-169, 2016 | 27 | 2016 |
Computational Prediction of Bacteriophage Host Ranges CJ Versoza, SP Pfeifer Microorganisms 10 (1), 149, 2022 | 25 | 2022 |