| Harnessing the power of RADseq for ecological and evolutionary genomics KR Andrews, JM Good, MR Miller, G Luikart, PA Hohenlohe Nature Reviews Genetics 17 (2), 81-92, 2016 | 1574 | 2016 |
| Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers MR Miller, JP Dunham, A Amores, WA Cresko, EA Johnson Genome research 17 (2), 240-248, 2007 | 1192 | 2007 |
| Mosaic analysis with double markers reveals tumor cell of origin in glioma C Liu, JC Sage, MR Miller, RGW Verhaak, S Hippenmeyer, H Vogel, ... Cell 146 (2), 209-221, 2011 | 742 | 2011 |
| Genotyping-by-sequencing in ecological and conservation genomics SR Narum, CA Buerkle, JW Davey, MR Miller, PA Hohenlohe Molecular ecology 22 (11), 2841, 2013 | 657 | 2013 |
| RAD capture (Rapture): flexible and efficient sequence-based genotyping OA Ali, SM O’Rourke, SJ Amish, MH Meek, G Luikart, C Jeffres, MR Miller Genetics 202 (2), 389-400, 2016 | 468 | 2016 |
| A conserved haplotype controls parallel adaptation in geographically distant salmonid populations MR Miller, JP Brunelli, PA Wheeler, S Liu, CE REXROAD III, Y Palti, ... Molecular ecology 21 (2), 237-249, 2012 | 268 | 2012 |
| The evolutionary basis of premature migration in Pacific salmon highlights the utility of genomics for informing conservation DJ Prince, SM O’Rourke, TQ Thompson, OA Ali, HS Lyman, IK Saglam, ... Science advances 3 (8), e1603198, 2017 | 233 | 2017 |
| Sex-dependent dominance maintains migration supergene in rainbow trout DE Pearse, NJ Barson, T Nome, G Gao, MA Campbell, A Abadía-Cardoso, ... Nature ecology & evolution 3 (12), 1731-1742, 2019 | 231 | 2019 |
| Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing PA Hohenlohe, MD Day, SJ Amish, MR Miller, N Kamps‐Hughes, ... Molecular ecology 22 (11), 3002-3013, 2013 | 227 | 2013 |
| The development and characterization of a 57 K single nucleotide polymorphism array for rainbow trout Y Palti, G Gao, S Liu, MP Kent, S Lien, MR Miller, CE Rexroad III, T Moen Molecular ecology resources 15 (3), 662-672, 2015 | 226 | 2015 |
| TU-tagging: cell type–specific RNA isolation from intact complex tissues MR Miller, KJ Robinson, MD Cleary, CQ Doe Nature methods 6 (6), 439-441, 2009 | 225 | 2009 |
| Thermal adaptation and acclimation of ectotherms from differing aquatic climates SR Narum, NR Campbell, KA Meyer, MR Miller, RW Hardy Molecular ecology 22 (11), 3090-3097, 2013 | 220 | 2013 |
| Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout DE Pearse, MR Miller, A Abadía-Cardoso, JC Garza Proceedings of the Royal Society B: Biological Sciences 281 (1783), 20140012, 2014 | 185 | 2014 |
| Developmentally regulated subnuclear genome reorganization restricts neural progenitor competence in Drosophila M Kohwi, JR Lupton, SL Lai, MR Miller, CQ Doe Cell 152 (1-2), 97-108, 2013 | 165 | 2013 |
| Genetic architecture of migration-related traits in rainbow and steelhead trout, Oncorhynchus mykiss BC Hecht, FP Thrower, MC Hale, MR Miller, KM Nichols G3: Genes, Genomes, Genetics 2 (9), 1113-1127, 2012 | 140 | 2012 |
| Anthropogenic habitat alteration leads to rapid loss of adaptive variation and restoration potential in wild salmon populations TQ Thompson, MR Bellinger, SM O’Rourke, DJ Prince, AE Stevenson, ... Proceedings of the National Academy of Sciences 116 (1), 177-186, 2019 | 134 | 2019 |
| Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA L Gay, MR Miller, PB Ventura, V Devasthali, Z Vue, HL Thompson, ... Genes & development 27 (1), 98-115, 2013 | 134 | 2013 |
| Evaluating adaptive divergence between migratory and nonmigratory ecotypes of a salmonid fish, Oncorhynchus mykiss MC Hale, FP Thrower, EA Berntson, MR Miller, KM Nichols G3: Genes, Genomes, Genetics 3 (8), 1273-1285, 2013 | 111 | 2013 |
| RAD marker microarrays enable rapid mapping of zebrafish mutations MR Miller, TS Atwood, BF Eames, JK Eberhart, YL Yan, JH Postlethwait, ... Genome biology 8, 1-10, 2007 | 91 | 2007 |
| Trade‐offs and utility of alternative RADseq methods: Reply to Puritz et al. KR Andrews, PA Hohenlohe, MR Miller, BK Hand, JE Seeb, G Luikart Molecular Ecology 23 (24), 5943-5946, 2014 | 81 | 2014 |
