| A survey on knowledge graphs: Representation, acquisition, and applications S Ji, S Pan, E Cambria, P Marttinen, SY Philip IEEE transactions on neural networks and learning systems 33 (2), 494-514, 2021 | 2095 | 2021 |
| Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations J Corander, P Marttinen, J Sirén, J Tang BMC bioinformatics 9, 1-14, 2008 | 992 | 2008 |
| Bayesian identification of admixture events using multilocus molecular markers J Corander, P Marttinen Molecular ecology 15 (10), 2833-2843, 2006 | 763 | 2006 |
| Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus N Kashtan, SE Roggensack, S Rodrigue, JW Thompson, SJ Biller, A Coe, ... Science 344 (6182), 416-420, 2014 | 586 | 2014 |
| BAPS 2: enhanced possibilities for the analysis of genetic population structure J Corander, P Waldmann, P Marttinen, MJ Sillanpää Bioinformatics 20 (15), 2363-2369, 2004 | 555 | 2004 |
| Dense genomic sampling identifies highways of pneumococcal recombination C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ... Nature genetics 46 (3), 305-309, 2014 | 402 | 2014 |
| Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 2674, 2019 | 286 | 2019 |
| A Bayesian method for identification of stock mixtures from molecular marker data J Corrander, P Marttinen, S Mäntyniemi | 243 | 2006 |
| Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ... PLoS genetics 10 (8), e1004547, 2014 | 231 | 2014 |
| Detection of recombination events in bacterial genomes from large population samples P Marttinen, WP Hanage, NJ Croucher, TR Connor, SR Harris, ... Nucleic acids research 40 (1), e6-e6, 2012 | 219 | 2012 |
| Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes JA Lees, M Vehkala, N Välimäki, SR Harris, C Chewapreecha, ... Nature Communications 7, 12797, 2016 | 215 | 2016 |
| EEG based emotion recognition: A tutorial and review X Li, Y Zhang, P Tiwari, D Song, B Hu, M Yang, Z Zhao, N Kumar, ... ACM Computing Surveys 55 (4), 1-57, 2022 | 169 | 2022 |
| International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact RA Gladstone, SW Lo, JA Lees, NJ Croucher, AJ Van Tonder, J Corander, ... EBioMedicine 43, 338-346, 2019 | 167 | 2019 |
| Efficient inference of recent and ancestral recombination within bacterial populations R Mostowy, NJ Croucher, CP Andam, J Corander, WP Hanage, ... Molecular biology and evolution 34 (5), 1167-1182, 2017 | 147 | 2017 |
| Cryptic ecology among host generalist Campylobacter jejuni in domestic animals SK Sheppard, L Cheng, G Meric, CPA De Haan, AK Llarena, P Marttinen, ... Molecular ecology 23 (10), 2442-2451, 2014 | 146 | 2014 |
| metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis A Cichonska, J Rousu, P Marttinen, AJ Kangas, P Soininen, T Lehtimäki, ... Bioinformatics 32 (13), 1981-1989, 2016 | 136 | 2016 |
| Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium S Arredondo-Alonso, J Top, A McNally, S Puranen, M Pesonen, J Pensar, ... MBio 11 (1), 10.1128/mbio. 03284-19, 2020 | 122* | 2020 |
| Deep learning for depression recognition with audiovisual cues: A review L He, M Niu, P Tiwari, P Marttinen, R Su, J Jiang, C Guo, H Wang, S Ding, ... Information Fusion 80, 56-86, 2022 | 119 | 2022 |
| Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus S Castillo-Ramírez, J Corander, P Marttinen, M Aldeljawi, WP Hanage, ... Genome biology 13, 1-13, 2012 | 109 | 2012 |
| Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis SK Sieberts, F Zhu, J García-García, E Stahl, A Pratap, G Pandey, ... Nature communications 7 (1), 12460, 2016 | 92 | 2016 |
