Enrichr: a comprehensive gene set enrichment analysis web server 2016 update MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ... Nucleic acids research 44 (W1), W90-W97, 2016 | 8451 | 2016 |
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool EY Chen, CM Tan, Y Kou, Q Duan, Z Wang, GV Meirelles, NR Clark, ... BMC bioinformatics 14, 1-14, 2013 | 6661 | 2013 |
Mesenchymal and haematopoietic stem cells form a unique bone marrow niche S Méndez-Ferrer, TV Michurina, F Ferraro, AR Mazloom, BD MacArthur, ... nature 466 (7308), 829-834, 2010 | 3880 | 2010 |
Synaptic, transcriptional and chromatin genes disrupted in autism S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, ... Nature 515 (7526), 209-215, 2014 | 2822 | 2014 |
Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ... Nature immunology 13 (11), 1118-1128, 2012 | 2169 | 2012 |
Patterns and rates of exonic de novo mutations in autism spectrum disorders BM Neale, Y Kou, L Liu, A Ma’Ayan, KE Samocha, A Sabo, CF Lin, ... Nature 485 (7397), 242-245, 2012 | 2059 | 2012 |
Gene set knowledge discovery with Enrichr Z Xie, A Bailey, MV Kuleshov, DJB Clarke, JE Evangelista, SL Jenkins, ... Current protocols 1 (3), e90, 2021 | 2018 | 2021 |
Functional atlas of the integrin adhesome R Zaidel-Bar, S Itzkovitz, A Ma'ayan, R Iyengar, B Geiger Nature cell biology 9 (8), 858-867, 2007 | 1450 | 2007 |
The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins AD Rouillard, GW Gundersen, NF Fernandez, Z Wang, CD Monteiro, ... Database 2016, baw100, 2016 | 1415 | 2016 |
ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments A Lachmann, H Xu, J Krishnan, SI Berger, AR Mazloom, A Ma'ayan Bioinformatics 26 (19), 2438-2444, 2010 | 978 | 2010 |
Minimal differentiation of classical monocytes as they survey steady-state tissues and transport antigen to lymph nodes C Jakubzick, EL Gautier, SL Gibbings, DK Sojka, A Schlitzer, TE Johnson, ... Immunity 39 (3), 599-610, 2013 | 956 | 2013 |
Single-cell immune landscape of human atherosclerotic plaques DM Fernandez, AH Rahman, NF Fernandez, A Chudnovskiy, ED Amir, ... Nature medicine 25 (10), 1576-1588, 2019 | 686 | 2019 |
ChEA3: transcription factor enrichment analysis by orthogonal omics integration AB Keenan, D Torre, A Lachmann, AK Leong, ML Wojciechowicz, V Utti, ... Nucleic acids research 47 (W1), W212-W224, 2019 | 654 | 2019 |
Massive mining of publicly available RNA-seq data from human and mouse A Lachmann, D Torre, AB Keenan, KM Jagodnik, HJ Lee, L Wang, ... Nature communications 9 (1), 1366, 2018 | 652 | 2018 |
Mutation of SHOC2 promotes aberrant protein N-myristoylation and causes Noonan-like syndrome with loose anagen hair V Cordeddu, E Di Schiavi, LA Pennacchio, A Ma'ayan, A Sarkozy, ... Nature genetics 41 (9), 1022-1026, 2009 | 461 | 2009 |
Systems biology of stem cell fate and cellular reprogramming BD MacArthur, A Ma'ayan, IR Lemischka Nature reviews Molecular cell biology 10 (10), 672-681, 2009 | 458 | 2009 |
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 411 | 2018 |
Differential cytokine contributions of perivascular haematopoietic stem cell niches N Asada, Y Kunisaki, H Pierce, Z Wang, NF Fernandez, A Birbrair, ... Nature cell biology 19 (3), 214-223, 2017 | 406 | 2017 |
Formation of regulatory patterns during signal propagation in a mammalian cellular network A Ma'ayan, SL Jenkins, S Neves, A Hasseldine, E Grace, B Dubin-Thaler, ... Science 309 (5737), 1078-1083, 2005 | 398 | 2005 |
Unexplored therapeutic opportunities in the human genome TI Oprea, CG Bologa, S Brunak, A Campbell, GN Gan, A Gaulton, ... Nature reviews Drug discovery 17 (5), 317-332, 2018 | 388 | 2018 |