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Feng Yue
Feng Yue
Director of Cancer Genomics, Professor of Biochemistry, Northwestern University
在 northwestern.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Topological domains in mammalian genomes identified by analysis of chromatin interactions
JR Dixon, S Selvaraj, F Yue, A Kim, Y Li, Y Shen, M Hu, JS Liu, B Ren
Nature 485 (7398), 376-380, 2012
69342012
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
19292014
A map of the cis-regulatory sequences in the mouse genome
Y Shen, F Yue, DF McCleary, Z Ye, L Edsall, S Kuan, U Wagner, J Dixon, ...
Nature 488 (7409), 116-120, 2012
15452012
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
12582020
Topologically associating domains are stable units of replication-timing regulation
BD Pope, T Ryba, V Dileep, F Yue, W Wu, O Denas, DL Vera, Y Wang, ...
Nature 515 (7527), 402-405, 2014
9362014
Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome
W Xie, CL Barr, A Kim, F Yue, AY Lee, J Eubanks, EL Dempster, B Ren
Cell 148 (4), 816-831, 2012
6002012
The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions
Y Wang, F Song, B Zhang, L Zhang, J Xu, D Kuang, D Li, MNK Choudhary, ...
Genome biology 19 (1), 151, 2018
5122018
Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues
GC Hon, N Rajagopal, Y Shen, DF McCleary, F Yue, MD Dang, B Ren
Nature genetics 45 (10), 1198-1206, 2013
4912013
HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient
T Yang, F Zhang, GG Yardımcı, F Song, RC Hardison, WS Noble, F Yue, ...
Genome research 27 (11), 1939-1949, 2017
4052017
An encyclopedia of mouse DNA elements (Mouse ENCODE)
JA Stamatoyannopoulos, M Snyder, R Hardison, B Ren, T Gingeras, ...
Genome biology 13 (8), 418, 2012
3702012
Integrative detection and analysis of structural variation in cancer genomes
JR Dixon, J Xu, V Dileep, Y Zhan, F Song, VT Le, GG Yardımcı, ...
Nature genetics 50 (10), 1388, 2018
3282018
Inherited GATA3 variants are associated with Ph-like childhood acute lymphoblastic leukemia and risk of relapse
V Perez-Andreu, KG Roberts, RC Harvey, W Yang, C Cheng, D Pei, H Xu, ...
Nature genetics 45 (12), 1494-1498, 2013
3282013
Epigenetic Priming of Enhancers Predicts Developmental Competence of hESC-Derived Endodermal Lineage Intermediates
A Wang, F Yue, Y Li, R Xie, T Harper, NA Patel, K Muth, J Palmer, Y Qiu, ...
Cell stem cell 16 (4), 386-399, 2015
2662015
Integrative analysis of haplotype-resolved epigenomes across human tissues
D Leung, I Jung, N Rajagopal, A Schmitt, S Selvaraj, AY Lee, CA Yen, ...
Nature 518 (7539), 350-354, 2015
2592015
Enhancing Hi-C data resolution with deep convolutional neural network HiCPlus
Y Zhang, L An, J Xu, B Zhang, WJ Zheng, M Hu, J Tang, F Yue
Nature communications 9 (1), 750, 2018
1822018
Measuring the reproducibility and quality of Hi-C data
GG Yardımcı, H Ozadam, MEG Sauria, O Ursu, KK Yan, T Yang, ...
Genome biology 20 (1), 57, 2019
1612019
An encyclopedia of mouse DNA elements (Mouse ENCODE)
EC Mouse, JA Stamatoyannopoulos, M Snyder, R Hardison, B Ren, ...
Genome Biol 13 (8), 418, 2012
1472012
FOXA1, GATA3 and PPARɣ cooperate to drive luminal subtype in bladder cancer: a molecular analysis of established human cell lines
JI Warrick, V Walter, H Yamashita, E Chung, L Shuman, VO Amponsa, ...
Scientific reports 6 (1), 1-15, 2016
1432016
A genome-wide association study of susceptibility to acute lymphoblastic leukemia in adolescents and young adults.
V Perez-Andreu, KG Roberts, H Xu, C Smith, H Zhang, W Yang, ...
Blood, 2014
1252014
An integrative ENCODE resource for cancer genomics
J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ...
Nature communications 11 (1), 1-11, 2020
1132020
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