| Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex JK Mich, LT Graybuck, EE Hess, JT Mahoney, Y Kojima, Y Ding, ... Cell reports 34 (13), 2021 | 126 | 2021 |
| Solexa sequencing identification of conserved and novel microRNAs in backfat of Large White and Chinese Meishan pigs C Chen, B Deng, M Qiao, R Zheng, J Chai, Y Ding, J Peng, S Jiang PloS one 7 (2), e31426, 2012 | 109 | 2012 |
| MLL4 prepares the enhancer landscape for Foxp3 induction via chromatin looping KZ Katarzyna Placek, Gangqing Hu, Kairong Cui, Dunfang Zhang, Yi Ding, Ji ... Nature Immunology (2017), 2017 | 79 | 2017 |
| Trac-looping measures genome structure and chromatin accessibility B Lai, Q Tang, W Jin, G Hu, D Wangsa, K Cui, BZ Stanton, G Ren, Y Ding, ... Nature methods 15 (9), 741-747, 2018 | 70 | 2018 |
| The conservation and signatures of lincRNAs in Marek’s disease of chicken Y He, Y Ding, F Zhan, H Zhang, B Han, G Hu, K Zhao, N Yang, Y Yu, ... Scientific reports 5 (1), 15184, 2015 | 59 | 2015 |
| HBx protein contributes to liver carcinogenesis by H3K4me3 modification through stabilizing WD repeat domain 5 protein W Gao, Z Jia, Y Tian, P Yang, H Sun, C Wang, Y Ding, M Zhang, Y Zhang, ... Hepatology 71 (5), 1678-1695, 2020 | 54 | 2020 |
| Enhancing neutralizing antibody production by an interferon-inducing porcine reproductive and respiratory syndrome virus strain R Wang, Y Xiao, T Opriessnig, Y Ding, Y Yu, Y Nan, Z Ma, PG Halbur, ... Vaccine 31 (47), 5537-5543, 2013 | 49 | 2013 |
| Single cell atlas of spinal cord injury in mice reveals a pro-regenerative signature in spinocerebellar neurons KJE Matson, DE Russ, C Kathe, I Hua, D Maric, Y Ding, J Krynitsky, ... Nature communications 13 (1), 5628, 2022 | 43 | 2022 |
| Integrated multimodal cell atlas of Alzheimer’s disease MI Gabitto, KJ Travaglini, VM Rachleff, ES Kaplan, B Long, J Ariza, Y Ding, ... Research Square, 2023 | 41 | 2023 |
| Genome-wide mapping of DNase I hypersensitive sites in rare cell populations using single-cell DNase sequencing KZ James Cooper, Yi Ding, Jiuzhou Song nature protocols 12 (No 11), 2342, 2017 | 40 | 2017 |
| Functional analysis of pig myostatin gene promoter with some adipogenesis- and myogenesis-related factors B Deng, J Wen, Y Ding, Q Gao, H Huang, Z Ran, Y Qian, J Peng, S Jiang Molecular and Cellular Biochemistry 363, 291-299, 2012 | 35 | 2012 |
| Topoisomerase 3β interacts with RNAi machinery to promote heterochromatin formation and transcriptional silencing in Drosophila SK Lee, Y Xue, W Shen, Y Zhang, Y Joo, M Ahmad, M Chinen, Y Ding, ... Nature communications 9 (1), 4946, 2018 | 32 | 2018 |
| A Shared Regulatory Element Controls the Initiation of Tcf7 Expression During Early T Cell and Innate Lymphoid Cell Developments C Harly, D Kenney, Y Wang, Y Ding, Y Zhao, P Awasthi, A Bhandoola Frontiers in immunology 11, 470, 2020 | 28 | 2020 |
| Topoisomerase 3β knockout mice show transcriptional and behavioural impairments associated with neurogenesis and synaptic plasticity Y Joo, Y Xue, Y Wang, RA McDevitt, N Sah, S Bossi, S Su, SK Lee, ... Nature communications 11 (1), 3143, 2020 | 27 | 2020 |
| Discovery of potential piRNAs from next generation sequences of the sexually mature porcine testes G Liu, B Lei, Y Li, K Tong, Y Ding, L Luo, X Xia, S Jiang, C Deng, Y Xiong, ... PloS one 7 (4), e34770, 2012 | 27 | 2012 |
| Long intergenic non-coding RNA GALMD3 in chicken Marek’s disease JSNY Bo Han, Yanghua He , Li Zhang, Yi Ding, Ling Lian, Chunfang Zhao Scientific Reports 7 (doi:10.1038/s41598-017-10900-2), 2017 | 26 | 2017 |
| DNA methylation profiles correlated to striped bass sperm fertility LC Woods, Y Li, Y Ding, J Liu, BJ Reading, SA Fuller, J Song BMC Genomics, 2018 | 25 | 2018 |
| Different regulation role of myostatin in differentiating pig ADSCs and MSCs into adipocytes B Deng, J Wen, Y Ding, J Peng, S Jiang Cell biochemistry and function 30 (2), 145-150, 2012 | 23 | 2012 |
| Ruminal transcriptomic analysis of grass-fed and grain-fed angus beef cattle Y Li, JA Carrillo, Y Ding, YH He, C Zhao, L Zan, J Song PLoS One 10 (6), e0116437, 2015 | 22 | 2015 |
| Genome-wide mapping of DNase I hypersensitive sites and association analysis with gene expression in MSB1 cells Y He, JA Carrillo, J Luo, Y Ding, F Tian, I Davidson, J Song Frontiers in genetics 5, 308, 2014 | 22 | 2014 |
