Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa M Stierl, P Stumpf, D Udwari, R Gueta, R Hagedorn, A Losi, W Gärtner, ... Journal of biological chemistry 286 (2), 1181-1188, 2011 | 462 | 2011 |
Stem Cell Differentiation as a Non-Markov Stochastic Process PS Stumpf, RCG Smith, M Lenz, A Schuppert, FJ Müller, A Babtie, ... Cell Systems 5 (3), 268-282. e7, 2017 | 185 | 2017 |
Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity BD MacArthur, A Sevilla, M Lenz, FJ Müller, BM Schuldt, AA Schuppert, ... Nature cell biology 14 (11), 1139-1147, 2012 | 175 | 2012 |
Thrombopoietin Metabolically Primes Hematopoietic Stem Cells to Megakaryocyte-Lineage Differentiation A Nakamura-Ishizu, T Matsumura, PS Stumpf, T Umemoto, H Takizawa, ... Cell reports 25 (7), 1772-1785. e6, 2018 | 81 | 2018 |
MicroRNA-146a regulates human foetal femur derived skeletal stem cell differentiation by down-regulating SMAD2 and SMAD3 KSC Cheung, N Sposito, PS Stumpf, DI Wilson, T Sanchez-Elsner, ... PloS one 9 (6), 2014 | 72 | 2014 |
Single-cell analyses and machine learning define hematopoietic progenitor and HSC-like cells derived from human PSCs A Fidanza, PS Stumpf, P Ramachandran, S Tamagno, A Babtie, ... Blood 136 (25), 2893-2904, 2020 | 50 | 2020 |
Quantification of intracellular payload release from polymersome nanoparticles E Scarpa, JL Bailey, AA Janeczek, PS Stumpf, AH Johnston, ROC Oreffo, ... Scientific Reports 6, 2016 | 50 | 2016 |
Theory of cell fate MJ Casey, PS Stumpf, BD MacArthur Wiley Interdisciplinary Reviews: Systems Biology and Medicine 12 (2), e1471, 2020 | 33 | 2020 |
Transfer learning efficiently maps bone marrow cell types from mouse to human using single-cell RNA sequencing PS Stumpf, X Du, H Imanishi, Y Kunisaki, Y Semba, T Noble, RCG Smith, ... Communications biology 3 (1), 736, 2020 | 31 | 2020 |
Genomic programming of IRF4-expressing human Langerhans cells S Sirvent, AF Vallejo, J Davies, K Clayton, Z Wu, J Woo, J Riddell, ... Nature Communications 11 (1), 313, 2020 | 22 | 2020 |
Nanog fluctuations in embryonic stem cells highlight the problem of measurement in cell biology RCG Smith, PS Stumpf, SJ Ridden, A Sim, S Filippi, HA Harrington, ... Biophysical Journal 112 (12), 2641-2652, 2017 | 22 | 2017 |
Machine learning of hematopoietic stem cell divisions from paired daughter cell expression profiles reveals effects of aging on self-renewal F Arai, PS Stumpf, YM Ikushima, K Hosokawa, A Roch, MP Lutolf, T Suda, ... Cell Systems 11 (6), 640-652. e5, 2020 | 16 | 2020 |
Machine learning of stem cell identities from single-cell expression data via regulatory network archetypes PS Stumpf, BD MacArthur Frontiers in Genetics 10, 2, 2019 | 16 | 2019 |
Lesch-Nyhan disease causes impaired energy metabolism and reduced developmental potential in midbrain dopaminergic cells S Bell, V McCarty, H Peng, M Jefri, N Hettige, L Antonyan, L Crapper, ... Stem Cell Reports 16 (7), 1749-1762, 2021 | 15 | 2021 |
Isolation, Differentiation, and Characterization of Human Bone Marrow Stem Cells In Vitro and In Vivo J Kanczler, RS Tare, P Stumpf, TJ Noble, C Black, ROC Oreffo Bone Research Protocols, 53-70, 2019 | 15 | 2019 |
An IRF1-IRF4 Toggle-Switch Controls Tolerogenic and Immunogenic Transcriptional Programming in Human Langerhans Cells J Davies, AF Vallejo, S Sirvent, G Porter, K Clayton, Y Qumbelo, P Stumpf, ... Frontiers in Immunology, 2249, 2021 | 12 | 2021 |
First steps towards the successful surface‐based cultivation of human embryonic stem cells in hanging drop systems JC Schulz, PS Stumpf, A Katsen‐Globa, A Sachinidis, J Hescheler, ... Engineering in life sciences 12 (6), 584-587, 2012 | 10 | 2012 |
Dual dean entrainment with volume ratio modulation for efficient droplet co-encapsulation: extreme single-cell indexing J Harrington, LB Esteban, J Butement, AF Vallejo, SIR Lane, B Sheth, ... Lab on a Chip 21 (17), 3378-3386, 2021 | 9 | 2021 |
Single‐cell pluripotency regulatory networks PS Stumpf, R Ewing, BD MacArthur Proteomics 16 (17), 2303-2312, 2016 | 7 | 2016 |
From mathematical modeling and machine learning to clinical reality BD MacArthur, PS Stumpf, ROC Oreffo Principles of Tissue Engineering, 37-51, 2020 | 6 | 2020 |