GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017 | 1328 | 2017 |
Nucleosomes and DNA methylation shape meiotic DSB frequency in Arabidopsis thaliana transposons and gene regulatory regions K Choi, X Zhao, AJ Tock, C Lambing, CJ Underwood, TJ Hardcastle, ... Genome research 28 (4), 532-546, 2018 | 206 | 2018 |
Selective methylation of histone H3 variant H3. 1 regulates heterochromatin replication Y Jacob*, E Bergamin*, MTA Donoghue, V Mongeon, C LeBlanc, P Voigt, ... Science 343 (6176), 1249-1253, 2014 | 172 | 2014 |
Natural variation and dosage of the HEI10 meiotic E3 ligase control Arabidopsis crossover recombination PA Ziolkowski*, CJ Underwood*, C Lambing, M Martinez-Garcia, ... Genes & Development 31 (3), 306-317, 2017 | 171 | 2017 |
Epigenetic activation of meiotic recombination near Arabidopsis thaliana centromeres via loss of H3K9me2 and non-CG DNA methylation CJ Underwood, K Choi, C Lambing, X Zhao, H Serra, F Borges, ... Genome research 28 (4), 519-531, 2018 | 164 | 2018 |
Massive crossover elevation via combination of HEI10 and recq4a recq4b during Arabidopsis meiosis H Serra, C Lambing, CH Griffin, SD Topp, DC Nageswaran, ... Proceedings of the National Academy of Sciences 115 (10), 2437-2442, 2018 | 123 | 2018 |
Genetic and epigenetic variation of transposable elements in Arabidopsis CJ Underwood, IR Henderson, RA Martienssen Current Opinion in Plant Biology 36, 135-141, 2017 | 95 | 2017 |
Recombination rate heterogeneity within Arabidopsis disease resistance genes K Choi*, C Reinhard*, H Serra, PA Ziolkowski, CJ Underwood, X Zhao, ... PLoS Genet 12 (7), e1006179, 2016 | 83 | 2016 |
A PARTHENOGENESIS allele from apomictic dandelion can induce egg cell division without fertilization in lettuce CJ Underwood, K Vijverberg, D Rigola, S Okamoto, C Oplaat, RHM Camp, ... Nature Genetics 54, 84-93, 2022 | 72 | 2022 |
Regulation of microRNA-mediated developmental changes by the SWR1 chromatin remodeling complex K Choi, J Kim, SY Müller, M Oh, C Underwood, I Henderson, I Lee Plant physiology 171 (2), 1128-1143, 2016 | 54 | 2016 |
A chromosome scale tomato genome built from complementary PacBio and Nanopore sequences alone reveals extensive linkage drag during breeding WMJ van Rengs, MHW Schmidt, S Effgen, DB Le, Y Wang, MWAM Zaidan, ... The Plant Journal 110 (2), 572-588, 2022 | 39 | 2022 |
Engineering apomixis: clonal seeds approaching the fields CJ Underwood, R Mercier Annual review of plant biology 73 (1), 201-225, 2022 | 37 | 2022 |
Heterogeneous transposable elements as silencers, enhancers and targets of meiotic recombination CJ Underwood, K Choi Chromosoma 128 (3), 279-296, 2019 | 27 | 2019 |
Meiosis in crops: from genes to genomes Y Wang, WMJ van Rengs, MWAM Zaidan, CJ Underwood Journal of experimental botany 72 (18), 6091-6109, 2021 | 26 | 2021 |
Natural variation identifies SNI1, the SMC5/6 component, as a modifier of meiotic crossover in Arabidopsis L Zhu, N Fernández-Jiménez, M Szymanska-Lejman, A Pelé, ... Proceedings of the National Academy of Sciences 118 (33), e2021970118, 2021 | 24 | 2021 |
The emerging role of small RNAs in ovule development, a kind of magic R Petrella, M Cucinotta, MA Mendes, CJ Underwood, L Colombo Plant Reproduction 34 (4), 335-351, 2021 | 16 | 2021 |
Apomixis Y Wang, CJ Underwood Current Biology 33 (8), R293-R295, 2023 | 4 | 2023 |
Argonautes team up to silence transposable elements in Arabidopsis CJ Underwood, RA Martienssen The EMBO journal 34 (5), 579-580, 2015 | 4 | 2015 |
A gap-free tomato genome built from complementary PacBio and Nanopore long DNA sequences reveals extensive linkage drag during breeding WMJ van Rengs, MHW Schmidt, S Effgen, Y Wang, MWAM Zaidan, ... BioRxiv, 2021.08. 30.456472, 2021 | 3 | 2021 |
Harnessing clonal gametes in hybrid crops to engineer polyploid genomes Y Wang, RR Fuentes, WMJ van Rengs, S Effgen, MWAM Zaidan, ... Nature Genetics, 1-5, 2024 | 2 | 2024 |