Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses S Roux, JR Brum, BE Dutilh, S Sunagawa, MB Duhaime, A Loy, ... Nature 537 (7622), 689-693, 2016 | 714 | 2016 |
Microbes on a bottle: substrate, season and geography influence community composition of microbes colonizing marine plastic debris S Oberbeckmann, AM Osborn, MB Duhaime PLoS One 11 (8), e0159289, 2016 | 486 | 2016 |
Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019 | 468 | 2019 |
Fate of microplastics and other small anthropogenic litter (SAL) in wastewater treatment plants depends on unit processes employed MR Michielssen, ER Michielssen, J Ni, MB Duhaime Environmental Science: Water Research & Technology 2 (6), 1064-1073, 2016 | 403 | 2016 |
Microplastics: addressing ecological risk through lessons learned K Syberg, FR Khan, H Selck, A Palmqvist, GT Banta, J Daley, L Sano, ... Environmental toxicology and chemistry 34 (5), 945-953, 2015 | 348 | 2015 |
Sulfur oxidation genes in diverse deep-sea viruses K Anantharaman, MB Duhaime, JA Breier, KA Wendt, BM Toner, GJ Dick Science 344 (6185), 757-760, 2014 | 257 | 2014 |
Cyanobacterial harmful algal blooms are a biological disturbance to Western Lake Erie bacterial communities MA Berry, TW Davis, RM Cory, MB Duhaime, TH Johengen, GW Kling, ... Environmental microbiology 19 (3), 1149-1162, 2017 | 196 | 2017 |
Diagnostic potential and interactive dynamics of the colorectal cancer virome GD Hannigan, MB Duhaime, MT Ruffin IV, CC Koumpouras, PD Schloss MBio 9 (6), 10.1128/mbio. 02248-18, 2018 | 192 | 2018 |
Distribution and modeled transport of plastic pollution in the Great Lakes, the world's largest freshwater resource RN Cable, D Beletsky, R Beletsky, K Wigginton, BW Locke, MB Duhaime Frontiers in Environmental Science 5, 45, 2017 | 175 | 2017 |
Towards quantitative metagenomics of wild viruses and other ultra‐low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method MB Duhaime, L Deng, BT Poulos, MB Sullivan Environmental microbiology 14 (9), 2526-2537, 2012 | 168 | 2012 |
Phage-specific metabolic reprogramming of virocells C Howard-Varona, MM Lindback, GE Bastien, N Solonenko, AA Zayed, ... The ISME journal 14 (4), 881-895, 2020 | 158 | 2020 |
Single‐cell and population level viral infection dynamics revealed by phage FISH, a method to visualize intracellular and free viruses E Allers, C Moraru, MB Duhaime, E Beneze, N Solonenko, ... Environmental microbiology 15 (8), 2306-2318, 2013 | 150 | 2013 |
Ocean viruses: rigorously evaluating the metagenomic sample-to-sequence pipeline MB Duhaime, MB Sullivan Virology 434 (2), 181-186, 2012 | 108 | 2012 |
Microbial and viral communities and their antibiotic resistance genes throughout a hospital wastewater treatment system ML Petrovich, A Zilberman, A Kaplan, GR Eliraz, Y Wang, K Langenfeld, ... Frontiers in microbiology 11, 153, 2020 | 85 | 2020 |
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1 MB Duhaime, A Wichels, J Waldmann, H Teeling, FO Glöckner The ISME journal 5 (1), 107-121, 2011 | 74 | 2011 |
The genetic and ecophysiological diversity of Microcystis GJ Dick, MB Duhaime, JT Evans, RM Errera, CM Godwin, JJ Kharbush, ... Environmental Microbiology 23 (12), 7278-7313, 2021 | 70 | 2021 |
JCoast–A biologist-centric software tool for data mining and comparison of prokaryotic (meta) genomes M Richter, T Lombardot, I Kostadinov, R Kottmann, MB Duhaime, ... BMC bioinformatics 9, 1-9, 2008 | 64 | 2008 |
Megx. net: integrated database resource for marine ecological genomics R Kottmann, I Kostadinov, MB Duhaime, PL Buttigieg, P Yilmaz, ... Nucleic acids research 38 (suppl_1), D391-D395, 2010 | 60 | 2010 |
The changing face of winter: lessons and questions from the Laurentian Great Lakes T Ozersky, AJ Bramburger, AK Elgin, HA Vanderploeg, J Wang, JA Austin, ... Journal of Geophysical Research: Biogeosciences 126 (6), e2021JG006247, 2021 | 51 | 2021 |
Ecological and genetic interactions between cyanobacteria and viruses in a low‐oxygen mat community inferred through metagenomics and metatranscriptomics AA Voorhies, SD Eisenlord, DN Marcus, MB Duhaime, BA Biddanda, ... Environmental Microbiology 18 (2), 358-371, 2016 | 48 | 2016 |