| Call of the wild: antibiotic resistance genes in natural environments HK Allen, J Donato, HH Wang, KA Cloud-Hansen, J Davies, ... Nature reviews microbiology 8 (4), 251-259, 2010 | 2654 | 2010 |
| In-feed antibiotic effects on the swine intestinal microbiome T Looft, TA Johnson, HK Allen, DO Bayles, DP Alt, RD Stedtfeld, WJ Sul, ... Proceedings of the National Academy of Sciences 109 (5), 1691-1696, 2012 | 1120 | 2012 |
| Functional metagenomics reveals diverse β-lactamases in a remote Alaskan soil HK Allen, LA Moe, J Rodbumrer, A Gaarder, J Handelsman The ISME journal 3 (2), 243-251, 2009 | 640 | 2009 |
| Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations T Looft, HK Allen, BL Cantarel, UY Levine, DO Bayles, DP Alt, B Henrissat, ... The ISME journal 8 (8), 1566-1576, 2014 | 435 | 2014 |
| Treatment, promotion, commotion: antibiotic alternatives in food-producing animals HK Allen, UY Levine, T Looft, M Bandrick, TA Casey Trends in microbiology 21 (3), 114-119, 2013 | 412 | 2013 |
| Finding alternatives to antibiotics HK Allen, J Trachsel, T Looft, TA Casey Annals of the New York Academy of Sciences 1323 (1), 91-100, 2014 | 295 | 2014 |
| Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor LL Williamson, BR Borlee, PD Schloss, C Guan, HK Allen, J Handelsman Applied and environmental microbiology 71 (10), 6335-6344, 2005 | 248 | 2005 |
| Meta-analysis to define a core microbiota in the swine gut DB Holman, BW Brunelle, J Trachsel, HK Allen MSystems 2 (3), 10.1128/msystems. 00004-17, 2017 | 233 | 2017 |
| Antibiotics in feed induce prophages in swine fecal microbiomes HK Allen, T Looft, DO Bayles, S Humphrey, UY Levine, D Alt, TB Stanton MBio 2 (6), 10.1128/mbio. 00260-11, 2011 | 224 | 2011 |
| Collateral effects of antibiotics on mammalian gut microbiomes T Looft, HK Allen Gut microbes 3 (5), 463-467, 2012 | 206 | 2012 |
| Antibiotic resistance gene discovery in food-producing animals HK Allen Current Opinion in Microbiology 19, 25-29, 2014 | 130 | 2014 |
| Carbadox has both temporary and lasting effects on the swine gut microbiota T Looft, HK Allen, TA Casey, DP Alt, TB Stanton Frontiers in microbiology 5, 276, 2014 | 117 | 2014 |
| Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin PD Schloss, HK Allen, AK Klimowicz, C Mlot, JA Gross, S Savengsuksa, ... DNA and cell biology 29 (9), 533-541, 2010 | 117 | 2010 |
| Resident microbiota of the gypsy moth midgut harbors antibiotic resistance determinants HK Allen, KA Cloud-Hansen, JM Wolinski, C Guan, S Greene, S Lu, ... DNA and cell biology 28 (3), 109-117, 2009 | 114 | 2009 |
| Altered egos: antibiotic effects on food animal microbiomes HK Allen, TB Stanton Annual review of microbiology 68 (1), 297-315, 2014 | 112 | 2014 |
| The agricultural antibiotic carbadox induces phage-mediated gene transfer in Salmonella BL Bearson, HK Allen, BW Brunelle, IS Lee, SR Casjens, TB Stanton Frontiers in microbiology 5, 52, 2014 | 97 | 2014 |
| Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host SMD Bearson, HK Allen, BL Bearson, T Looft, BW Brunelle, JD Kich, ... Infection, Genetics and Evolution 16, 330-340, 2013 | 97 | 2013 |
| Butyrate-producing bacteria, including mucin degraders, from the swine intestinal tract UY Levine, T Looft, HK Allen, TB Stanton Applied and environmental microbiology 79 (12), 3879-3881, 2013 | 90 | 2013 |
| Estimating population diversity with CatchAll J Bunge, L Woodard, D Böhning, JA Foster, S Connolly, HK Allen Bioinformatics 28 (7), 1045-1047, 2012 | 86 | 2012 |
| Pipeline for amplifying and analyzing amplicons of the V1–V3 region of the 16S rRNA gene HK Allen, DO Bayles, T Looft, J Trachsel, BE Bass, DP Alt, SMD Bearson, ... BMC research notes 9, 1-6, 2016 | 69 | 2016 |
Torey LooftResearch microbiologist在 usda.gov 的电子邮件经过验证
