Computational correction of copy number effect improves specificity of CRISPR–Cas9 essentiality screens in cancer cells RM Meyers, JG Bryan, JM McFarland, BA Weir, AE Sizemore, H Xu, ... Nature genetics 49 (12), 1779-1784, 2017 | 1611 | 2017 |
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center B Amos, C Aurrecoechea, M Barba, A Barreto, EY Basenko, R Belnap, ... Nucleic acids research 50 (D1), D898-D911, 2022 | 334 | 2022 |
Cliques and cavities in the human connectome AE Sizemore, C Giusti, A Kahn, JM Vettel, RF Betzel, DS Bassett Journal of computational neuroscience 44, 115-145, 2018 | 314 | 2018 |
The why, how, and when of representations for complex systems L Torres, AS Blevins, D Bassett, T Eliassi-Rad SIAM Review 63 (3), 435-485, 2021 | 254 | 2021 |
The importance of the whole: topological data analysis for the network neuroscientist AE Sizemore, JE Phillips-Cremins, R Ghrist, DS Bassett Network Neuroscience 3 (3), 656-673, 2019 | 197 | 2019 |
Memory sequencing reveals heritable single-cell gene expression programs associated with distinct cellular behaviors SM Shaffer, BL Emert, RAR Hueros, C Cote, G Harmange, DL Schaff, ... Cell 182 (4), 947-959. e17, 2020 | 174 | 2020 |
Dynamic graph metrics: Tutorial, toolbox, and tale AE Sizemore, DS Bassett NeuroImage 180, 417-427, 2018 | 167 | 2018 |
Interrogation of mammalian protein complex structure, function, and membership using genome-scale fitness screens J Pan, RM Meyers, BC Michel, N Mashtalir, AE Sizemore, JN Wells, ... Cell systems 6 (5), 555-568. e7, 2018 | 143 | 2018 |
Modeling and interpreting mesoscale network dynamics AN Khambhati, AE Sizemore, RF Betzel, DS Bassett NeuroImage 180, 337-349, 2018 | 142 | 2018 |
Small-molecule targeting of brachyury transcription factor addiction in chordoma T Sharifnia, MJ Wawer, T Chen, QY Huang, BA Weir, A Sizemore, ... Nature medicine 25 (2), 292-300, 2019 | 140 | 2019 |
Gender diversity statement and code notebook v1. 0 D Zhou, EJ Cornblath, J Stiso, EG Teich, JD Dworkin, AS Blevins, ... Zenodo, 2020 | 123 | 2020 |
Classification of weighted networks through mesoscale homological features A Sizemore, C Giusti, DS Bassett Journal of Complex Networks 5 (2), 245-273, 2017 | 102 | 2017 |
Hunters, busybodies and the knowledge network building associated with deprivation curiosity DM Lydon-Staley, D Zhou, AS Blevins, P Zurn, DS Bassett Nature human behaviour 5 (3), 327-336, 2021 | 91 | 2021 |
Knowledge gaps in the early growth of semantic feature networks AE Sizemore, EA Karuza, C Giusti, DS Bassett Nature human behaviour 2 (9), 682-692, 2018 | 90 | 2018 |
Brain-wide visual habituation networks in wild type and fmr1 zebrafish E Marquez-Legorreta, L Constantin, M Piber, IA Favre-Bulle, MA Taylor, ... Nature Communications 13 (1), 895, 2022 | 37 | 2022 |
Architecture and evolution of semantic networks in mathematics texts NH Christianson, A Sizemore Blevins, DS Bassett Proceedings of the Royal Society A 476 (2239), 20190741, 2020 | 28 | 2020 |
Hunters, busybodies, and the knowledge network building associated with curiosity DM Lydon-Staley, D Zhou, AS Blevins, P Zurn, DS Bassett PsyArXiv, 2019 | 27 | 2019 |
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023 J Alvarez-Jarreta, B Amos, C Aurrecoechea, S Bah, M Barba, A Barreto, ... Nucleic acids research 52 (D1), D808-D816, 2024 | 26 | 2024 |
Modeling brain, symptom, and behavior in the winds of change DM Lydon-Staley, EJ Cornblath, AS Blevins, DS Bassett Neuropsychopharmacology 46 (1), 20-32, 2021 | 23 | 2021 |
Gender diversity statement and code notebook v1. 0. 2020 D Zhou, EJ Cornblath, J Stiso, EG Teich, JD Dworkin, AS Blevins, ... URL Httpsdoi Org105281zenodo 3672110, 2020 | 19 | 2020 |