Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma M Castellarin, RL Warren, JD Freeman, L Dreolini, M Krzywinski, ... Genome research 22 (2), 299-306, 2012 | 2088 | 2012 |
Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution SP Shah, RD Morin, J Khattra, L Prentice, T Pugh, A Burleigh, A Delaney, ... Nature 461 (7265), 809-813, 2009 | 1328 | 2009 |
The cardiac transcription factors Nkx2‐5 and GATA‐4 are mutual cofactors D Durocher, F Charron, R Warren, RJ Schwartz, M Nemer The EMBO journal, 1997 | 835 | 1997 |
The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse MP McLeod, RL Warren, WWL Hsiao, N Araki, M Myhre, C Fernandes, ... Proceedings of the National Academy of Sciences 103 (42), 15582-15587, 2006 | 800 | 2006 |
Assembling millions of short DNA sequences using SSAKE RL Warren, GG Sutton, SJM Jones, RA Holt Bioinformatics 23 (4), 500-501, 2007 | 710 | 2007 |
Neo-antigens predicted by tumor genome meta-analysis correlate with increased patient survival SD Brown, RL Warren, EA Gibb, SD Martin, JJ Spinelli, BH Nelson, ... Genome research 24 (5), 743-750, 2014 | 679 | 2014 |
ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter SD Jackman, BP Vandervalk, H Mohamadi, J Chu, S Yeo, SA Hammond, ... Genome research 27 (5), 768-777, 2017 | 630 | 2017 |
Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing JD Freeman, RL Warren, JR Webb, BH Nelson, RA Holt Genome research 19 (10), 1817-1824, 2009 | 507 | 2009 |
Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million … RL Warren, JD Freeman, T Zeng, G Choe, S Munro, R Moore, JR Webb, ... Genome research 21 (5), 790-797, 2011 | 401 | 2011 |
Co-occurrence of anaerobic bacteria in colorectal carcinomas RL Warren, DJ Freeman, S Pleasance, P Watson, RA Moore, K Cochrane, ... Microbiome 1, 1-12, 2013 | 332 | 2013 |
Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach MN Bainbridge, RL Warren, M Hirst, T Romanuik, T Zeng, A Go, ... BMC genomics 7, 1-11, 2006 | 283 | 2006 |
Complete haplotype sequence of the human immunoglobulin heavy-chain variable, diversity, and joining genes and characterization of allelic and copy-number variation CT Watson, KM Steinberg, J Huddleston, RL Warren, M Malig, J Schein, ... The American Journal of Human Genetics 92 (4), 530-546, 2013 | 251 | 2013 |
Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism RL Warren, CI Keeling, MMS Yuen, A Raymond, GA Taylor, ... The Plant Journal 83 (2), 189-212, 2015 | 235 | 2015 |
The cumate gene-switch: a system for regulated expression in mammalian cells A Mullick, Y Xu, R Warren, M Koutroumanis, C Guilbault, S Broussau, ... BMC biotechnology 6, 1-18, 2006 | 227 | 2006 |
NanoSim: nanopore sequence read simulator based on statistical characterization C Yang, J Chu, RL Warren, I Birol GigaScience 6 (4), gix010, 2017 | 226 | 2017 |
LINKS: Scalable, alignment-free scaffolding of draft genomes with long reads RL Warren, C Yang, BP Vandervalk, B Behsaz, A Lagman, SJM Jones, ... GigaScience 4 (1), s13742-015-0076-3, 2015 | 222 | 2015 |
Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts CA D’souza, JW Kronstad, G Taylor, R Warren, M Yuen, G Hu, WH Jung, ... MBio 2 (1), 10.1128/mbio. 00342-10, 2011 | 217 | 2011 |
Derivation of HLA types from shotgun sequence datasets RL Warren, G Choe, DJ Freeman, M Castellarin, S Munro, R Moore, ... Genome medicine 4, 1-8, 2012 | 191 | 2012 |
ARCS: scaffolding genome drafts with linked reads S Yeo, L Coombe, RL Warren, J Chu, I Birol Bioinformatics 34 (5), 725-731, 2018 | 179 | 2018 |
Brain microbial populations in HIV/AIDS: α-proteobacteria predominate independent of host immune status WG Branton, KK Ellestad, F Maingat, BM Wheatley, E Rud, RL Warren, ... PloS one 8 (1), e54673, 2013 | 167 | 2013 |