Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust HMT Choi, M Schwarzkopf, ME Fornace, A Acharya, G Artavanis, ... Development 145 (12), dev165753, 2018 | 937 | 2018 |
Fast nonlocal filtering applied to electron cryomicroscopy J Darbon, A Cunha, TF Chan, S Osher, GJ Jensen 2008 5th IEEE International Symposium on biomedical imaging: from nano to …, 2008 | 331 | 2008 |
Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana AHK Roeder, V Chickarmane, A Cunha, B Obara, BS Manjunath, ... PLoS biology 8 (5), e1000367, 2010 | 280 | 2010 |
Feratt: Facial expression recognition with attention net PD Marrero Fernandez, FA Guerrero Pena, T Ren, A Cunha Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2019 | 135 | 2019 |
Cell cycle regulates cell type in the Arabidopsis sepal AHK Roeder, A Cunha, CK Ohno, EM Meyerowitz Development 139 (23), 4416-4427, 2012 | 119 | 2012 |
Auxin depletion from leaf primordia contributes to organ patterning J Qi, Y Wang, T Yu, A Cunha, B Wu, T Vernoux, E Meyerowitz, Y Jiao Proceedings of the National Academy of Sciences 111 (52), 18769-18774, 2014 | 117 | 2014 |
Computational morphodynamics: a modeling framework to understand plant growth V Chickarmane, AHK Roeder, PT Tarr, A Cunha, C Tobin, EM Meyerowitz Annual review of plant biology 61 (1), 65-87, 2010 | 94 | 2010 |
Multiclass weighted loss for instance segmentation of cluttered cells FA Guerrero-Pena, PDM Fernandez, TI Ren, M Yui, E Rothenberg, ... 2018 25th IEEE International Conference on Image Processing (ICIP), 2451-2455, 2018 | 84 | 2018 |
Computational morphodynamics of plants: integrating development over space and time AHK Roeder, PT Tarr, C Tobin, X Zhang, V Chickarmane, A Cunha, ... Nature reviews Molecular cell biology 12 (4), 265-273, 2011 | 80 | 2011 |
CNN-based preprocessing to optimize watershed-based cell segmentation in 3D confocal microscopy images D Eschweiler, TV Spina, RC Choudhury, E Meyerowitz, A Cunha, ... 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019 | 69 | 2019 |
A computational image analysis glossary for biologists AHK Roeder, A Cunha, MC Burl, EM Meyerowitz Development 139 (17), 3071-3080, 2012 | 67 | 2012 |
The cell tracking challenge: 10 years of objective benchmarking M Maška, V Ulman, P Delgado-Rodriguez, E Gómez-de-Mariscal, ... Nature Methods 20 (7), 1010-1020, 2023 | 56 | 2023 |
Automatic boundary sizing for 2D and 3D meshes A Cunha, S Canann, S Saigal ASME APPLIED MECHANICS DIVISION-PUBLICATIONS-AMD 220, 65-72, 1997 | 48 | 1997 |
A bezier-based approach to unstructured moving meshes D Cardoze, A Cunha, GL Miller, T Phillips, N Walkington Proceedings of the twentieth annual symposium on Computational geometry, 310-319, 2004 | 38 | 2004 |
J regularization improves imbalanced multiclass segmentation FAG Pena, PDM Fernandez, PT Tarr, TI Ren, EM Meyerowitz, A Cunha 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 1-5, 2020 | 35 | 2020 |
Osseointegration of atmospheric plasma‐sprayed titanium implants: Influence of the native oxide layer A Cunha, RP Renz, E Blando, RB de Oliveira, R Hübler Journal of Biomedical Materials Research Part A: An Official Journal of The …, 2014 | 31 | 2014 |
Cell segmentation in 3D confocal images using supervoxel merge-forests with CNN-based hypothesis selection J Stegmaier, TV Spina, AX Falcao, A Bartschat, R Mikut, E Meyerowitz, ... 2018 IEEE 15th International symposium on biomedical imaging (ISBI 2018 …, 2018 | 25 | 2018 |
Macropinocytosis-mediated membrane recycling drives neural crest migration by delivering F-actin to the lamellipodium Y Li, WG Gonzalez, A Andreev, W Tang, S Gandhi, A Cunha, D Prober, ... Proceedings of the National Academy of Sciences 117 (44), 27400-27411, 2020 | 23 | 2020 |
A weakly supervised method for instance segmentation of biological cells FA Guerrero-Peña, PDM Fernandez, TI Ren, A Cunha Domain Adaptation and Representation Transfer and Medical Image Learning …, 2019 | 20 | 2019 |
Fast noise reduction in digital images and video AL Cunha, JB Darbon US Patent 8,139,650, 2012 | 19 | 2012 |