Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease BC Young, T Golubchik, EM Batty, R Fung, H Larner-Svensson, ... Proceedings of the National Academy of Sciences 109 (12), 4550-4555, 2012 | 313 | 2012 |
Metagenomics for pathogen detection in public health RR Miller, V Montoya, JL Gardy, DM Patrick, P Tang Genome medicine 5, 1-14, 2013 | 288 | 2013 |
Within-host evolution of Staphylococcus aureus during asymptomatic carriage T Golubchik, EM Batty, RR Miller, H Farr, BC Young, H Larner-Svensson, ... PloS one 8 (5), e61319, 2013 | 227 | 2013 |
Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus RG Everitt, X Didelot, EM Batty, RR Miller, K Knox, BC Young, R Bowden, ... Nature communications 5 (1), 3956, 2014 | 154 | 2014 |
Prevalence of Staphylococcus aureus protein A (spa) mutants in the community and hospitals in Oxfordshire AA Votintseva, R Fung, RR Miller, K Knox, H Godwin, DH Wyllie, ... BMC microbiology 14, 1-11, 2014 | 121 | 2014 |
Decline of meticillin-resistant Staphylococcus aureus in Oxfordshire hospitals is strain-specific and preceded infection-control intensification DH Wyllie, AS Walker, R Miller, C Moore, SR Williamson, I Schlackow, ... BMJ open 1 (1), e000160, 2011 | 69 | 2011 |
Carriage of methicillin-resistant Staphylococcus aureus by wild urban Norway rats (Rattus norvegicus) CG Himsworth, RR Miller, V Montoya, L Hoang, MG Romney, ... PLoS One 9 (2), e87983, 2014 | 65 | 2014 |
Formalin fixation increases deamination mutation signature but should not lead to false positive mutations in clinical practice LM Prentice, RR Miller, J Knaggs, A Mazloomian, R Aguirre Hernandez, ... PLoS One 13 (4), e0196434, 2018 | 60 | 2018 |
Dynamics of acquisition and loss of carriage of Staphylococcus aureus strains in the community: the effect of clonal complex RR Miller, AS Walker, H Godwin, R Fung, A Votintseva, R Bowden, ... Journal of Infection 68 (5), 426-439, 2014 | 60 | 2014 |
Multiple-strain colonization in nasal carriers of Staphylococcus aureus AA Votintseva, RR Miller, R Fung, K Knox, H Godwin, TEA Peto, ... Journal of clinical microbiology 52 (4), 1192-1200, 2014 | 57 | 2014 |
Lyme disease diagnosed by alternative methods: a phenotype similar to that of chronic fatigue syndrome DM Patrick, RR Miller, JL Gardy, SM Parker, MG Morshed, TS Steiner, ... Clinical Infectious Diseases 61 (7), 1084-1091, 2015 | 52 | 2015 |
Beaver fever: whole-genome characterization of waterborne outbreak and sporadic isolates to study the zoonotic transmission of giardiasis CKM Tsui, R Miller, M Uyaguari-Diaz, P Tang, C Chauve, W Hsiao, ... Msphere 3 (2), 10.1128/msphere. 00090-18, 2018 | 43 | 2018 |
Healthcare-associated outbreak of meticillin-resistant< i> Staphylococcus aureus</i> bacteraemia: role of a cryptic variant of an epidemic clone RR Miller, JR Price, EM Batty, X Didelot, D Wyllie, T Golubchik, DW Crook, ... Journal of Hospital Infection, 2013 | 37 | 2013 |
Multi-site and nasal swabbing for carriage of Staphylococcus aureus: what does a single nose swab predict? BC Young, AA Votintseva, D Foster, H Godwin, RR Miller, LW Anson, ... Journal of Hospital Infection 96 (3), 232-237, 2017 | 33 | 2017 |
Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing J Bouquet, T Li, JL Gardy, X Kang, S Stevens, J Stevens, M VanNess, ... PloS one 14 (3), e0212193, 2019 | 29 | 2019 |
The emergence of meticillin-resistant Staphylococcus aureus among injecting drug users SR Atkinson, J Paul, E Sloan, S Curtis, R Miller Journal of Infection 58 (5), 339-345, 2009 | 29 | 2009 |
Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus. Nat Commun 5: 3956 RG Everitt, X Didelot, EM Batty, RR Miller, K Knox, BC Young, R Bowden, ... | 24 | 2014 |
Is MRSA admission bacteraemia community-acquired? A case control study R Miller, H Esmail, T Peto, S Walker, D Crook, D Wyllie Journal of Infection 56 (3), 163-170, 2008 | 24 | 2008 |
RNA-seq analysis of gene expression, viral pathogen, and B-cell/T-cell receptor signatures in complex chronic disease J Bouquet, JL Gardy, S Brown, J Pfeil, RR Miller, M Morshed, ... Clinical Infectious Diseases 64 (4), 476-481, 2017 | 23 | 2017 |
Comprehensive human amniotic fluid metagenomics supports the sterile womb hypothesis HC Wang, GX Yang, Y Hu, P Lam, K Sangha, D Siciliano, A Swenerton, ... Scientific Reports 12 (1), 6875, 2022 | 21 | 2022 |