The CCP4 suite: integrative software for macromolecular crystallography J Agirre, M Atanasova, H Bagdonas, CB Ballard, A Baslé, ... Acta Crystallographica Section D: Structural Biology 79 (6), 449-461, 2023 | 178 | 2023 |
A structure-based proposal for a comprehensive myotoxic mechanism of phospholipase A2-like proteins from viperid snake venoms CAH Fernandes, RJ Borges, B Lomonte, MRM Fontes Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (12), 2265-2276, 2014 | 107 | 2014 |
ARCIMBOLDO_LITE: single-workstation implementation and use M Sammito, C Millán, D Frieske, E Rodríguez-Freire, RJ Borges, I Usón Acta Crystallographica Section D: Biological Crystallography 71 (9), 1921-1930, 2015 | 64 | 2015 |
Structural, functional, and bioinformatics studies reveal a new snake venom homologue phospholipase A2 class JI dos Santos, M Cintra‐Francischinelli, RJ Borges, CAH Fernandes, ... Proteins: Structure, Function, and Bioinformatics 79 (1), 61-78, 2011 | 54 | 2011 |
Structural bases for a complete myotoxic mechanism: crystal structures of two non-catalytic phospholipases A2-like from Bothrops brazili venom CAH Fernandes, EJ Comparetti, RJ Borges, S Huancahuire-Vega, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834 (12), 2772-2781, 2013 | 43 | 2013 |
PLA 2-like proteins myotoxic mechanism: a dynamic model description RJ Borges, N Lemke, MRM Fontes Scientific reports 7 (1), 15514, 2017 | 41 | 2017 |
Beyond hemostasis: a snake venom serine protease with potassium channel blocking and potential antitumor activities J Boldrini-França, EL Pinheiro-Junior, S Peigneur, MB Pucca, FA Cerni, ... Scientific reports 10 (1), 1-11, 2020 | 35 | 2020 |
Functional and structural studies of a Phospholipase A2-like protein complexed to zinc ions: Insights on its myotoxicity and inhibition mechanism RJ Borges, FF Cardoso, CAH Fernandes, TR Dreyer, DS de Moraes, ... Biochimica et Biophysica Acta (BBA)-General Subjects 1861 (1), 3199-3209, 2017 | 33 | 2017 |
Transcriptionally active LTR retrotransposons in Eucalyptus genus are differentially expressed and insertionally polymorphic HS Marcon, DS Domingues, JC Silva, RJ Borges, FF Matioli, ... BMC plant biology 15 (1), 198, 2015 | 33 | 2015 |
Structural and mechanistic insights into the cleavage of clustered O-glycan patches-containing glycoproteins by mucinases of the human gut V Taleb, Q Liao, Y Narimatsu, A García-García, I Compañón, RJ Borges, ... Nature Communications 13 (1), 4324, 2022 | 26 | 2022 |
The synthetic Varespladib molecule is a multi-functional inhibitor for PLA2 and PLA2-like ophidic toxins GHM Salvador, RJ Borges, B Lomonte, MR Lewin, MRM Fontes Biochimica et Biophysica Acta (BBA)-General Subjects 1865 (7), 129913, 2021 | 26 | 2021 |
Structural basis of phospholipase A2-like myotoxin inhibition by chicoric acid, a novel potent inhibitor of ophidian toxins FF Cardoso, RJ Borges, TR Dreyer, GHM Salvador, WLG Cavalcante, ... Biochimica et Biophysica Acta (BBA)-General Subjects 1862 (12), 2728-2737, 2018 | 23 | 2018 |
ALEPH: a network-oriented approach for the generation of fragment-based libraries and for structure interpretation A Medina, J Trivino, RJ Borges, C Millán, I Uson, MD Sammito Acta Crystallographica Section D: Structural Biology 76 (3), 193-208, 2020 | 21 | 2020 |
Structural evidence for a fatty acid-independent myotoxic mechanism for a phospholipase A2-like toxin GHM Salvador, JI dos Santos, RJ Borges, MRM Fontes Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1866 (3), 473-481, 2018 | 15 | 2018 |
SEQUENCE SLIDER: expanding polyalanine fragments for phasing with multiple side-chain hypotheses RJ Borges, K Meindl, J Trivino, M Sammito, A Medina, C Millán, M Alcorlo, ... Acta Crystallographica Section D: Structural Biology 76 (3), 221-237, 2020 | 14 | 2020 |
Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins LFG de Lima, RJ Borges, MA Viviescas, CAH Fernandes, MRM Fontes Biochimie 142, 11-21, 2017 | 12 | 2017 |
Fragment-based determination of a proteinase K structure from MicroED data using ARCIMBOLDO_SHREDDER LS Richards, C Millán, J Miao, MW Martynowycz, MR Sawaya, T Gonen, ... Acta Crystallographica Section D: Structural Biology 76 (8), 703-712, 2020 | 11 | 2020 |
Verification: model-free phasing with enhanced predicted models in ARCIMBOLDO_SHREDDER A Medina, E Jiménez, I Caballero, A Castellví, J Triviño Valls, M Alcorlo, ... Acta Crystallographica Section D: Structural Biology 78 (11), 2022 | 10 | 2022 |
Biochemical, pharmacological and structural characterization of BmooMP-I, a new P–I metalloproteinase from Bothrops moojeni venom GHM Salvador, RJ Borges, MMC Eulálio, LD Dos Santos, MRM Fontes Biochimie 179, 54-64, 2020 | 9 | 2020 |
Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED LS Richards, MD Flores, C Millán, C Glynn, CT Zee, MR Sawaya, ... ACS bio & med Chem Au 3 (2), 201-210, 2023 | 8 | 2023 |