SVMTriP: A Method to Predict Antigenic Epitopes Using Support Vector Machine to Integrate Tri-Peptide Similarity and Propensity B Yao, L Zhang, S Liang, C Zhang PLOS ONE 7 (9), e45152, 2012 | 359 | 2012 |
A knowledge-based energy function for protein− ligand, protein− protein, and protein− DNA complexes C Zhang, S Liu, Q Zhu, Y Zhou Journal of medicinal chemistry 48 (7), 2325-2335, 2005 | 330 | 2005 |
Protein binding site prediction using an empirical scoring function S Liang, C Zhang, S Liu, Y Zhou Nucleic acids research 34 (13), 3698-3707, 2006 | 308 | 2006 |
A physical reference state unifies the structure‐derived potential of mean force for protein folding and binding S Liu, C Zhang, H Zhou, Y Zhou Proteins: Structure, Function, and Bioinformatics 56 (1), 93-101, 2004 | 222 | 2004 |
Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis G Ren, M Xie, Y Dou, S Zhang, C Zhang, B Yu Proceedings of the National Academy of Sciences 109 (31), 12817-12821, 2012 | 206 | 2012 |
EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results S Liang, D Zheng, DM Standley, B Yao, M Zacharias, C Zhang BMC bioinformatics 11, 1-6, 2010 | 185 | 2010 |
Editing of an alpha-kafirin gene family increases, digestibility and protein quality in sorghum A Li, S Jia, A Yobi, Z Ge, SJ Sato, C Zhang, R Angelovici, TE Clemente, ... Plant physiology 177 (4), 1425-1438, 2018 | 175 | 2018 |
An accurate, residue‐level, pair potential of mean force for folding and binding based on the distance‐scaled, ideal‐gas reference state C Zhang, S Liu, H Zhou, Y Zhou Protein Science 13 (2), 400-411, 2004 | 174 | 2004 |
PhosphoSVM: prediction of phosphorylation sites by integrating various protein sequence attributes with a support vector machine Y Dou, B Yao, C Zhang Amino acids 46, 1459-1469, 2014 | 164 | 2014 |
Accurate and efficient loop selections by the DFIRE‐based all‐atom statistical potential CHI Zhang, S Liu, Y Zhou Protein science 13 (2), 391-399, 2004 | 145 | 2004 |
Conformational B-cell epitope prediction on antigen protein structures: a review of current algorithms and comparison with common binding site prediction methods B Yao, D Zheng, S Liang, C Zhang PloS one 8 (4), e62249, 2013 | 136 | 2013 |
Heat stress yields a unique MADS box transcription factor in determining seed size and thermal sensitivity C Chen, K Begcy, K Liu, JJ Folsom, Z Wang, C Zhang, H Walia Plant physiology 171 (1), 606-622, 2016 | 135 | 2016 |
Identification of differentially expressed genes between sorghum genotypes with contrasting nitrogen stress tolerance by genome-wide transcriptional profiling M Gelli, Y Duo, AR Konda, C Zhang, D Holding, I Dweikat BMC genomics 15, 1-16, 2014 | 132 | 2014 |
Prediction of antigenic epitopes on protein surfaces by consensus scoring S Liang, D Zheng, C Zhang, M Zacharias BMC bioinformatics 10, 1-10, 2009 | 122 | 2009 |
Allelic variants of OsHKT1; 1 underlie the divergence between indica and japonica subspecies of rice (Oryza sativa) for root sodium content MT Campbell, N Bandillo, FRA Al Shiblawi, S Sharma, K Liu, Q Du, ... PLoS genetics 13 (6), e1006823, 2017 | 120 | 2017 |
The Pseudomonas syringae type III effector HopD1 suppresses effector‐triggered immunity, localizes to the endoplasmic reticulum, and targets the Arabidopsis … A Block, TY Toruño, CG Elowsky, C Zhang, J Steinbrenner, J Beynon, ... New phytologist 201 (4), 1358-1370, 2014 | 118 | 2014 |
DFVF: database of fungal virulence factors T Lu, B Yao, C Zhang Database 2012, 2012 | 110 | 2012 |
Distinct Pseudomonas type‐III effectors use a cleavable transit peptide to target chloroplasts G Li, JE Froehlich, C Elowsky, J Msanne, AC Ostosh, C Zhang, T Awada, ... The Plant Journal 77 (2), 310-321, 2014 | 108 | 2014 |
Sharpening low-energy, standard-model tests via correlation coefficients in neutron β decay S Gardner, C Zhang Physical Review Letters 86 (25), 5666-5669, 2001 | 106 | 2001 |
Fold recognition by concurrent use of solvent accessibility and residue depth S Liu, C Zhang, S Liang, Y Zhou Proteins: Structure, Function, and Bioinformatics 68 (3), 636-645, 2007 | 103 | 2007 |