Human endogenous retroviruses in glioblastoma multiforme Z Yuan, Y Yang, N Zhang, C Soto, X Jiang, Z An, WJ Zheng Microorganisms 9 (4), 764, 2021 | 14 | 2021 |
A transformation-based method for auditing the IS-A hierarchy of biomedical terminologies in the Unified Medical Language System F Zheng, J Shi, Y Yang, WJ Zheng, L Cui Journal of the American Medical Informatics Association 27 (10), 1568-1575, 2020 | 11 | 2020 |
An evidence-based lexical pattern approach for quality assurance of Gene Ontology relations R Abeysinghe, Y Yang, M Bartels, WJ Zheng, L Cui Briefings in Bioinformatics 23 (3), bbac122, 2022 | 5 | 2022 |
Genome-wide analyses on single disease samples for potential biomarkers and biological features of molecular subtypes: a case study in gastric cancer W Zeng, N Rao, Q Li, G Wang, D Liu, Z Li, Y Yang International Journal of Biological Sciences 14 (8), 833, 2018 | 4 | 2018 |
Ensemble pretrained language models to extract biomedical knowledge from literature Z Li, Q Wei, LC Huang, J Li, Y Hu, YS Chuang, J He, A Das, VK Keloth, ... Journal of the American Medical Informatics Association, ocae061, 2024 | 3 | 2024 |
The IL6/JAK/STAT3 signaling axis is a therapeutic vulnerability in SMARCB1-deficient bladder cancer CS Amara, KR Kami Reddy, Y Yuntao, YS Chan, DWB Piyarathna, ... Nature communications 15 (1), 1373, 2024 | 2 | 2024 |
Aging-and alcohol-associated spatial transcriptomic signature in mouse acute pancreatitis reveals heterogeneity of inflammation and potential pathogenic factors RR Tindall, Y Yang, I Hernandez, A Qin, J Li, Y Zhang, TH Gomez, ... Journal of Molecular Medicine 102 (8), 1051-1061, 2024 | 1 | 2024 |
AlphaFold 2 Monomer: Deployment in an HPC Environment Y Yang, Z Li, DJH Shih, WJ Zheng | 1 | 2022 |
Systematic characterization of protein structural features of alternative splicing isoforms using AlphaFold 2 Y Yang, Y Xie, Z Li, CS Diala, MA Ali, R Li, Y Xu, A Wu, P Kim, ... bioRxiv, 2024.01. 30.578053, 2024 | | 2024 |
Representation Learning of Biological Concepts: A Systematic Review Y Yang, X Zuo, A Das, X Hua, W Zheng Current Bioinformatics 19 (1), 12, 2023 | | 2023 |
Elucidating the role of SMARCB1 in bladder cancer progression and metastasis CS Amara, KR Reddy, Y Yang, BW Danthasinghe, A Bellman, AB Apollo, ... Cancer Research 82 (12_Supplement), 2417-2417, 2022 | | 2022 |