| The developmental transcriptome of Drosophila melanogaster BR Graveley, AN Brooks, JW Carlson, MO Duff, JM Landolin, L Yang, ... Nature 471 (7339), 473-479, 2011 | 1684 | 2011 |
| RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex CR Hale, P Zhao, S Olson, MO Duff, BR Graveley, L Wells, RM Terns, ... Cell 139 (5), 945-956, 2009 | 1411 | 2009 |
| Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ... Science 330 (6012), 1787-1797, 2010 | 1084 | 2010 |
| A large-scale binding and functional map of human RNA-binding proteins EL Van Nostrand, P Freese, GA Pratt, X Wang, X Wei, R Xiao, SM Blue, ... Nature 583 (7818), 711-719, 2020 | 853 | 2020 |
| Diversity and dynamics of the Drosophila transcriptome JB Brown, N Boley, R Eisman, GE May, MH Stoiber, MO Duff, BW Booth, ... Nature 512 (7515), 393-399, 2014 | 741 | 2014 |
| Reinforcement learning methods for continuous-time Markov decision problems S Bradtke, M Duff Advances in neural information processing systems 7, 1994 | 500 | 1994 |
| Genomewide characterization of non-polyadenylated RNAs L Yang, MO Duff, BR Graveley, GG Carmichael, LL Chen Genome biology 12, 1-14, 2011 | 484 | 2011 |
| Regulatory divergence in Drosophila revealed by mRNA-seq CJ McManus, JD Coolon, MO Duff, J Eipper-Mains, BR Graveley, ... Genome research 20 (6), 816-825, 2010 | 442 | 2010 |
| Optimal Learning: Computational procedures for Bayes-adaptive Markov decision processes MOG Duff University of Massachusetts Amherst, 2002 | 408 | 2002 |
| Comparative analysis of the transcriptome across distant species MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ... Nature 512 (7515), 445-448, 2014 | 333 | 2014 |
| Conservation of an RNA regulatory map between Drosophila and mammals AN Brooks, L Yang, MO Duff, KD Hansen, JW Park, S Dudoit, SE Brenner, ... Genome research 21 (2), 193-202, 2011 | 293 | 2011 |
| The transcriptional diversity of 25 Drosophila cell lines L Cherbas, A Willingham, D Zhang, L Yang, Y Zou, BD Eads, JW Carlson, ... Genome research 21 (2), 301-314, 2011 | 286 | 2011 |
| Global patterns of tissue-specific alternative polyadenylation in Drosophila P Smibert, P Miura, JO Westholm, S Shenker, G May, MO Duff, D Zhang, ... Cell reports 1 (3), 277-289, 2012 | 262 | 2012 |
| Genome-wide identification of zero nucleotide recursive splicing in Drosophila MO Duff, S Olson, X Wei, SC Garrett, A Osman, M Bolisetty, A Plocik, ... Nature 521 (7552), 376-379, 2015 | 215 | 2015 |
| Dopamine, uncertainty and TD learning Y Niv, MO Duff, P Dayan Behavioral and brain Functions 1, 1-9, 2005 | 190 | 2005 |
| Comparative validation of the D. melanogaster modENCODE transcriptome annotation ZX Chen, D Sturgill, J Qu, H Jiang, S Park, N Boley, AM Suzuki, ... Genome research 24 (7), 1209-1223, 2014 | 176 | 2014 |
| Incidence of pancreatic cancer is dramatically increased by a high fat, high calorie diet in KrasG12D mice HH Chang, A Moro, K Takakura, HY Su, A Mo, M Nakanishi, RT Waldron, ... PloS one 12 (9), e0184455, 2017 | 129 | 2017 |
| Global analysis of trans-splicing in Drosophila CJ McManus, MO Duff, J Eipper-Mains, BR Graveley Proceedings of the National Academy of Sciences 107 (29), 12975-12979, 2010 | 127 | 2010 |
| Regulation of alternative splicing in Drosophila by 56 RNA binding proteins AN Brooks, MO Duff, G May, L Yang, M Bolisetty, J Landolin, K Wan, ... Genome research 25 (11), 1771-1780, 2015 | 99 | 2015 |
| Monte Carlo matrix inversion and reinforcement learning A Barto, M Duff Advances in neural information processing systems 6, 1993 | 97 | 1993 |
