| The road to metagenomics: from microbiology to DNA sequencing technologies and bioinformatics A Escobar-Zepeda, A Vera-Ponce de León, A Sanchez-Flores Frontiers in genetics 6, 348, 2015 | 426 | 2015 |
| Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota A Escobar-Zepeda, A Sanchez-Flores, MQ Baruch Food microbiology 57, 116-127, 2016 | 197 | 2016 |
| MGnify: the microbiome sequence data analysis resource in 2023 L Richardson, B Allen, G Baldi, M Beracochea, ML Bileschi, T Burdett, ... Nucleic Acids Research 51 (D1), D753-D759, 2023 | 114 | 2023 |
| Analysis of sequencing strategies and tools for taxonomic annotation: defining standards for progressive metagenomics A Escobar-Zepeda, EE Godoy-Lozano, L Raggi, L Segovia, E Merino, ... Scientific reports 8 (1), 12034, 2018 | 112 | 2018 |
| Strain-level characterization of broad host range mobile genetic elements transferring antibiotic resistance from the human microbiome SC Forster, J Liu, N Kumar, EL Gulliver, JA Gould, A Escobar-Zepeda, ... Nature Communications 13 (1), 1445, 2022 | 81 | 2022 |
| Evaluation of the bacterial diversity of Spanish-type chorizo during the ripening process using high-throughput sequencing and physicochemical characterization C Juárez-Castelán, I García-Cano, A Escobar-Zepeda, ... Meat Science 150, 7-13, 2019 | 62 | 2019 |
| Bacterial diversity and the geochemical landscape in the southwestern Gulf of Mexico EE Godoy-Lozano, A Escobar-Zepeda, L Raggi, E Merino, ... Frontiers in microbiology 9, 2528, 2018 | 53 | 2018 |
| Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi F Barreto-Curiel, ST Ramirez-Puebla, E Ringø, A Escobar-Zepeda, ... Animal Feed Science and Technology 245, 91-103, 2018 | 42 | 2018 |
| Metagenomic profiling and microbial metabolic potential of perdido fold belt (NW) and campeche knolls (SE) in the Gulf of Mexico L Raggi, F García-Guevara, EE Godoy-Lozano, A Martínez-Santana, ... Frontiers in Microbiology 11, 1825, 2020 | 23 | 2020 |
| Bacterial and archaeal profiling of hypersaline microbial mats and endoevaporites, under natural conditions and methanogenic microcosm experiments JQ García-Maldonado, A Escobar-Zepeda, L Raggi, BM Bebout, ... Extremophiles 22, 903-916, 2018 | 17 | 2018 |
| Paenarthrobacter sp. GOM3 is a novel marine species with monoaromatic degradation relevance J Rosas-Díaz, A Escobar-Zepeda, L Adaya, J Rojas-Vargas, ... Frontiers in Microbiology 12, 713702, 2021 | 13 | 2021 |
| Metagenomic analysis and antibacterial activity of kefir microorganisms BD González‐Orozco, I García‐Cano, A Escobar‐Zepeda, ... Journal of Food Science 88 (7), 2933-2949, 2023 | 11 | 2023 |
| Citrobacter amalonaticus Inhibits the Growth of Citrobacter rodentium in the Gut Lumen C Mullineaux-Sanders, D Carson, EGD Hopkins, I Glegola-Madejska, ... Mbio 12 (5), 10.1128/mbio. 02410-21, 2021 | 11 | 2021 |
| An extended taxonomic profile and metabolic potential analysis of pulque microbial community using metagenomics A Escobar-Zepeda, JJ Montor, C Olvera, A Sanchez-Flores, ... J Food Sci Technol 5, 83-97, 2020 | 10 | 2020 |
| The road to metagenomics: from microbiology to DNA sequencing technologies and bioinformatics. Front Genet 6: 1–15 A Escobar-Zepeda, AVP De León, A Sanchez-Flores | 9 | 2015 |
| Analysis of sequencing strategies and tools for taxonomic annotation: defining standards for progressive metagenomics. Sci Rep 8: 12034 A Escobar-Zepeda, EE Godoy-Lozano, L Raggi, L Segovia, E Merino, ... | 8 | 2018 |
| Revisiting microbial diversity in hypersaline microbial mats from Guerrero Negro for a better understanding of methanogenic archaeal communities JQ García-Maldonado, H Latisnere-Barragán, A Escobar-Zepeda, ... Microorganisms 11 (3), 812, 2023 | 6 | 2023 |
| Definition of the metagenomic profile of ocean water samples from the Gulf of Mexico based on comparison with reference samples from sites worldwide A Loza, F García-Guevara, L Segovia, A Escobar-Zepeda, ... Frontiers in Microbiology 12, 781497, 2022 | 6 | 2022 |
| How a holobiome perspective could promote intensification, biosecurity and eco-efficiency in the shrimp aquaculture industry ED Gutiérrez-Pérez, R Vazquez-Juarez, FJ Magallon-Barajas, ... Frontiers in Marine Science 9, 975042, 2022 | 3 | 2022 |
| Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote A Escobar-Zepeda, P Rosas-Escobar, L Marquez Valdelamar, ... BMC Research Notes 14, 1-6, 2021 | 3 | 2021 |
