BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS computational biology 10 (4), e1003537, 2014 | 6368 | 2014 |
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019 | 3104 | 2019 |
Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis D Bryant, R Bouckaert, J Felsenstein, NA Rosenberg, A RoyChoudhury Molecular biology and evolution 29 (8), 1917-1932, 2012 | 956 | 2012 |
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012 | 819 | 2012 |
bModelTest: Bayesian phylogenetic site model averaging and model comparison RR Bouckaert, AJ Drummond BMC evolutionary biology 17, 1-11, 2017 | 745 | 2017 |
DensiTree: making sense of sets of phylogenetic trees RR Bouckaert Bioinformatics 26 (10), 1372-1373, 2010 | 690 | 2010 |
WEKA manual for version 3-9-1 RR Bouckaert, E Frank, M Hall, R Kirkby, P Reutemann, A Seewald, ... University of Waikato: Hamilton, New Zealand, 1-341, 2016 | 636* | 2016 |
Bayesian evolutionary analysis with BEAST AJ Drummond, RR Bouckaert Cambridge University Press, 2015 | 593 | 2015 |
Evaluating the replicability of significance tests for comparing learning algorithms RR Bouckaert, E Frank Pacific-Asia conference on knowledge discovery and data mining, 3-12, 2004 | 481 | 2004 |
Species delimitation using genome-wide SNP data AD Leaché, MK Fujita, VN Minin, RR Bouckaert Systematic biology 63 (4), 534-542, 2014 | 472 | 2014 |
WEKA---Experiences with a Java Open-Source Project RR Bouckaert, E Frank, MA Hall, G Holmes, B Pfahringer, P Reutemann, ... The Journal of Machine Learning Research 11, 2533-2541, 2010 | 458 | 2010 |
StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates HA Ogilvie, RR Bouckaert, AJ Drummond Molecular biology and evolution 34 (8), 2101-2114, 2017 | 457 | 2017 |
Bayesian network classifiers in weka RR Bouckaert Department of Computer Science, 2004 | 427* | 2004 |
Bayesian belief networks: from construction to inference RR Bouckaert | 364 | 1995 |
Naive bayes for text classification with unbalanced classes E Frank, RR Bouckaert Knowledge Discovery in Databases: PKDD 2006: 10th European Conference on …, 2006 | 321 | 2006 |
Choosing between two learning algorithms based on calibrated tests RR Bouckaert Proceedings of the Twentieth International Conference on International …, 2003 | 232 | 2003 |
Probabilistic network construction using the minimum description length principle RR Bouckaert European conference on symbolic and quantitative approaches to reasoning and …, 1993 | 227 | 1993 |
DensiTree 2: Seeing trees through the forest RR Bouckaert, J Heled BioRxiv, 012401, 2014 | 220 | 2014 |
Properties of Bayesian belief network learning algorithms RR Bouckaert Uncertainty in Artificial Intelligence, 102-109, 1994 | 185 | 1994 |
Looking for trees in the forest: summary tree from posterior samples J Heled, RR Bouckaert BMC evolutionary biology 13, 1-11, 2013 | 156 | 2013 |