Genetic and transcriptional evolution alters cancer cell line drug response U Ben-David, B Siranosian, G Ha, H Tang, Y Oren, K Hinohara, ... Nature 560 (7718), 325-330, 2018 | 836 | 2018 |
Lineage tracing in humans enabled by mitochondrial mutations and single-cell genomics LS Ludwig, CA Lareau, JC Ulirsch, E Christian, C Muus, LH Li, K Pelka, ... Cell 176 (6), 1325-1339. e22, 2019 | 436 | 2019 |
Cycling cancer persister cells arise from lineages with distinct programs Y Oren, M Tsabar, MS Cuoco, L Amir-Zilberstein, HF Cabanos, JC Hütter, ... Nature 596 (7873), 576-582, 2021 | 290 | 2021 |
Combined analysis of variation in core, accessory and regulatory genome regions provides a super-resolution view into the evolution of bacterial populations A McNally, Y Oren, D Kelly, B Pascoe, S Dunn, T Sreecharan, M Vehkala, ... PLoS genetics 12 (9), e1006280, 2016 | 198 | 2016 |
Aging-associated alterations in mammary epithelia and stroma revealed by single-cell RNA sequencing CMC Li, H Shapiro, C Tsiobikas, LM Selfors, H Chen, J Rosenbluth, ... Cell reports 33 (13), 2020 | 92 | 2020 |
Transfer of noncoding DNA drives regulatory rewiring in bacteria Y Oren, MB Smith, NI Johns, M Kaplan Zeevi, D Biran, EZ Ron, ... Proceedings of the National Academy of Sciences 111 (45), 16112-16117, 2014 | 74 | 2014 |
Genomic avenue to avian colisepticemia S Huja, Y Oren, E Trost, E Brzuszkiewicz, D Biran, J Blom, A Goesmann, ... MBio 6 (1), 10.1128/mbio. 01681-14, 2015 | 70 | 2015 |
AXL and error-prone DNA replication confer drug resistance and offer strategies to treat EGFR-mutant lung cancer A Noronha, N Belugali Nataraj, JS Lee, B Zhitomirsky, Y Oren, S Oster, ... Cancer discovery 12 (11), 2666-2683, 2022 | 53 | 2022 |
Fur is the master regulator of the extraintestinal pathogenic Escherichia coli response to serum S Huja, Y Oren, D Biran, S Meyer, U Dobrindt, J Bernhard, D Becher, ... MBio 5 (4), 10.1128/mbio. 01460-14, 2014 | 46 | 2014 |
Aging-associated alterations in the mammary gland revealed by single-cell RNA sequencing CMC Li, H Shapiro, C Tsiobikas, L Selfors, H Chen, GK Gray, Y Oren, ... BioRxiv, 773408, 2019 | 10 | 2019 |
The operonic location of auto-transcriptional repressors is highly conserved in bacteria ND Rubinstein, D Zeevi, Y Oren, G Segal, T Pupko Molecular biology and evolution 28 (12), 3309-3318, 2011 | 9 | 2011 |
Cycling cancer persister cells arise from lineages with distinct transcriptional and metabolic programs Y Oren, M Tsabar, HF Cabanos, MS Cuoco, E Zaganjor, PI Thakore, ... bioRxiv, 2020.06. 05.136358, 2020 | 7 | 2020 |
Standing on the shoulders of microbes: How cancer biologists are expanding their view of hard‐to‐kill persister cells Y Oren Molecular Systems Biology 18 (7), e11168, 2022 | 5 | 2022 |
Abstract PR06: Contribution of mutant microenvironment to hereditary cancer: Single-cell gene expression profiling of a genetically engineered mouse model of human hereditary … CM Li, Y Oren, A Regev, JS Brugge Cancer Research 78 (10_Supplement), PR06-PR06, 2018 | 4 | 2018 |
Contribution of mutant microenvironment to hereditary cancer: Single-cell gene expression profiling of a genetically engineered mouse model of human hereditary BRCA1-related … CM Li, Y Oren, A Regev, JS Brugge CANCER RESEARCH 78 (10), 25-26, 2018 | 2 | 2018 |
Hunting down rare drug-tolerant cycling cells with Watermelon Y Oren Nature Reviews Cancer 22 (8), 434-435, 2022 | 1 | 2022 |
Synthetic DNA barcodes identify singlets in scRNA-seq datasets and evaluate doublet algorithms Z Zhang, ME Melzer, KM Arun, H Sun, CJ Eriksson, I Fabian, S Shaashua, ... Cell Genomics 4 (7), 2024 | | 2024 |
ATF3 characterizes aggressive drug-tolerant persister cells in HGSOC K Böpple, Y Oren, WS Henry, M Dong, S Weller, J Thiel, M Kleih, ... Cell Death & Disease 15 (4), 290, 2024 | | 2024 |
Characterizing Rare Dormant and Cycling Lineages Using the Watermelon System A Handly-Santana, Y Oren Methods in molecular biology (Clifton, NJ) 2811, 165-175, 2024 | | 2024 |
High-resolution lineage tracing for the study of cancer drug persistence at the single-cell level B Zhitomirsky, J Ezike, E Hopkins, BP Danysh, L Parida, Y Oren, G Getz Cancer Research 83 (7_Supplement), 2859-2859, 2023 | | 2023 |