| PanWeb: a web interface for pan-genomic analysis Y Pantoja, K Pinheiro, A Veras, F Araújo, A Lopes de Sousa, ... PLoS One 12 (5), e0178154, 2017 | 32 | 2017 |
| GapBlaster—a graphical gap filler for prokaryote genomes PHCG de Sa, F Miranda, A Veras, DM de Melo, S Soares, K Pinheiro, ... PLoS One 11 (5), e0155327, 2016 | 31 | 2016 |
| PhageWeb–Web interface for rapid identification and characterization of prophages in bacterial genomes AL Sousa, D Maués, A Lobato, EF Franco, K Pinheiro, F Araújo, Y Pantoja, ... Frontiers in genetics 9, 644, 2018 | 27 | 2018 |
| Assessing the Genotypic Differences between Strains of Corynebacterium pseudotuberculosis biovar equi through Comparative Genomics RA Baraúna, RTJ Ramos, AAO Veras, KC Pinheiro, LJ Benevides, ... PLoS One 12 (1), e0170676, 2017 | 23 | 2017 |
| Pan4Draft: a computational tool to improve the accuracy of pan-genomic analysis using draft genomes A Veras, F Araujo, K Pinheiro, L Guimarães, V Azevedo, S Soares, ... Scientific reports 8 (1), 9670, 2018 | 14 | 2018 |
| The impact of quality filter for RNA-Seq PHCG de Sá, AAO Veras, AR Carneiro, KC Pinheiro, AC Pinto, ... Gene 563 (2), 165-171, 2015 | 12 | 2015 |
| Efficiency of Corynebacterium pseudotuberculosis Cp31 genome assembly with the Hi-Q enzyme on an Ion Torrent PGM sequencing platform AAO Veras, P de Sá, KC Pinheiro, D Assis das Graças, ... J Proteomics Bioinform 7, 374-378, 2014 | 12 | 2014 |
| Genome Sequence of Corynebacterium pseudotuberculosis MB20 bv. equi Isolated from a Pectoral Abscess of an Oldenburg Horse in California RA Baraúna, LC Guimarães, AAO Veras, PHCG de Sá, DA Graças, ... Genome announcements 2 (6), 10.1128/genomea. 00977-14, 2014 | 10 | 2014 |
| Whole-genome sequencing of Leishmania infantum chagasi isolates from Honduras and Brazil FT Silveira, EC Sousa Junior, RV Silvestre, AG Costa-Martins, ... Microbiology Resource Announcements 10 (48), e00471-21, 2021 | 9 | 2021 |
| Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil DSS Ferreira, RB Kato, FM Miranda, K da Costa Pinheiro, PLC Fonseca, ... Data in brief 18, 1581-1587, 2018 | 9 | 2018 |
| Viral metagenomics reveals widely diverse viral community of Freshwater Amazonian Lake WG Nogueira, BVA Gois, KC Pinheiro, AO Aragão, ALC Queiroz, AL Silva, ... Frontiers in Public Health 10, 869886, 2022 | 5 | 2022 |
| Bioinformatics approaches applied in pan-genomics and their challenges Y Pantoja, K da Costa Pinheiro, F Araujo, AL da Costa Silva, R Ramos Pan-Genomics: Applications, Challenges, and Future Prospects, 43-64, 2020 | 4 | 2020 |
| Computational techniques in data integration and big data handling in omics AA de Oliveira Veras, PHCG De Sá, K da Costa Pinheiro, D Barh, ... Omics Technologies and Bio-Engineering, 209-222, 2018 | 3 | 2018 |
| In silico approach to identify microsatellite candidate biomarkers to differentiate the biovar of Corynebacterium pseudotuberculosis genomes KC Pinheiro, BVA Gois, WG Nogueira, FA Araújo, ALC Queiroz, ... Frontiers in Bioinformatics 2, 931583, 2022 | 2 | 2022 |
| Bioinformatics on the road: taking training to students and researchers beyond state capitals M Braga, F Araujo, E Franco, K Pinheiro, J Silva, D Maués, S Neto, ... Frontiers in Education 6, 726930, 2021 | 2 | 2021 |
| Corynebacterium pseudotuberculosis RNA-seq data from abiotic stresses PHCG de Sá, AAO Veras, AR Carneiro, RA Baraúna, LC Guimarães, ... Data in brief 5, 963-966, 2015 | 1 | 2015 |
| Analysis of viral diversity in dogs with acute gastroenteritis from Brazilian Amazon DR de Deus, JAM Siqueira, MAC Maués, ECS Júnior, ... Infection, Genetics and Evolution 123, 105637, 2024 | | 2024 |
| SATIN: a micro and mini satellite mining tool of total genome and coding regions with analysis of perfect repeats polymorphism in coding regions CWD Dantas, SR da Costa Neto, SIA Alves, K da Costa Pinheiro, ... BMC bioinformatics 25 (1), 217, 2024 | | 2024 |
| RNA sequencing and gene co-expression network of in vitro matured oocytes and blastocysts of buffalo PDPB Santana, KC Pinheiro, LCS Pereira, SS Andrade, FF Aburjaile, ... Animal Reproduction 21 (2), e20230131, 2024 | | 2024 |
| Environmental health of water bodies from a Brazilian Amazon Metropolis based on a conventional and metagenomic approach JAM Siqueira, DM Teixeira, GJL da Piedade, CO Souza, TCF Moura, ... Journal of Applied Microbiology 135 (5), lxae101, 2024 | | 2024 |
