| Variation in the microbiota of Ixodes ticks with regard to geography, species, and sex W Van Treuren, L Ponnusamy, RJ Brinkerhoff, A Gonzalez, CM Parobek, ... Applied and environmental microbiology 81 (18), 6200-6209, 2015 | 163 | 2015 |
| SeekDeep: single-base resolution de novo clustering for amplicon deep sequencing NJ Hathaway, CM Parobek, JJ Juliano, JA Bailey Nucleic acids research 46 (4), e21-e21, 2017 | 100 | 2017 |
| Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse JT Lin, NJ Hathaway, DL Saunders, C Lon, S Balasubramanian, ... The Journal of infectious diseases 212 (6), 999-1008, 2015 | 75 | 2015 |
| Drug-Resistance and Population Structure of Plasmodium falciparum Across the Democratic Republic of Congo Using High-Throughput Molecular Inversion Probes O Aydemir, M Janko, NJ Hathaway, R Verity, MK Mwandagalirwa, ... The Journal of infectious diseases 218 (6), 946-955, 2018 | 74 | 2018 |
| The Impact of Antimalarial Resistance on the Genetic Structure of Plasmodium falciparum in the DRC RJ Verity, O Aydemir, NF Brazeau, OJ Watson, NJ Hathaway, ... bioRxiv, 656561, 2019 | 57 | 2019 |
| Plasmodium falciparum is evolving to escape malaria rapid diagnostic tests in Ethiopia SM Feleke, EN Reichert, H Mohammed, BG Brhane, K Mekete, H Mamo, ... Nature microbiology 6 (10), 1289-1299, 2021 | 55 | 2021 |
| Sex-based differences in clearance of chronic Plasmodium falciparum infection JJ Briggs, N Teyssier, JI Nankabirwa, J Rek, P Jagannathan, E Arinatiwe, ... medRxiv, 2020 | 50 | 2020 |
| Differing patterns of selection and geospatial genetic diversity within two leading Plasmodium vivax candidate vaccine antigens CM Parobek, JA Bailey, NJ Hathaway, D Socheat, WO Rogers, JJ Juliano PLoS Negl Trop Dis 8 (4), e2796, 2014 | 49 | 2014 |
| A deep sequencing tool for partitioning clearance rates following antimalarial treatment in polyclonal infections N Mideo, JA Bailey, NJ Hathaway, B Ngasala, DL Saunders, C Lon, ... Evolution, medicine, and public health 2016 (1), 21-36, 2016 | 43 | 2016 |
| A novel CRISPR-based malaria diagnostic capable of Plasmodium detection, species differentiation, and drug-resistance genotyping CH Cunningham, CM Hennelly, JT Lin, R Ubalee, RM Boyce, EM Mulogo, ... EBioMedicine 68, 103415, 2021 | 42 | 2021 |
| A deep sequencing approach to estimate Plasmodium falciparum complexity of infection (COI) and explore apical membrane antigen 1 diversity RH Miller, NJ Hathaway, O Kharabora, K Mwandagalirwa, A Tshefu, ... Malaria journal 16 (1), 490, 2017 | 40 | 2017 |
| Increased risk of low birth weight in women with placental malaria associated with P. falciparum VAR2CSA clade JC Patel, NJ Hathaway, CM Parobek, KL Thwai, M Madanitsa, ... Scientific reports 7 (1), 1-12, 2017 | 40 | 2017 |
| Sensitive, highly multiplexed sequencing of microhaplotypes from the Plasmodium falciparum heterozygome SK Tessema, NJ Hathaway, NB Teyssier, M Murphy, A Chen, O Aydemir, ... bioRxiv, 2020 | 33 | 2020 |
| Surveillance for sulfadoxine-pyrimethamine resistant malaria parasites in the Lake and Southern Zones, Tanzania, using pooling and next-generation sequencing JM Ngondi, DS Ishengoma, SM Doctor, KL Thwai, C Keeler, S Mkude, ... Malaria journal 16 (1), 236, 2017 | 33 | 2017 |
| Reuse of malaria rapid diagnostic tests for amplicon deep sequencing to estimate Plasmodium falciparum transmission intensity in western Uganda RM Boyce, N Hathaway, T Fulton, R Reyes, M Matte, M Ntaro, E Mulogo, ... Scientific reports 8 (1), 10159, 2018 | 26 | 2018 |
| Antimalarial drug resistance profiling of Plasmodium falciparum infections in Ghana using molecular inversion probes and next generation sequencing. BA Mensah, O Aydemir, JL Myers-Hansen, M Opoku, NJ Hathaway, ... Antimicrobial Agents and Chemotherapy, 2020 | 17 | 2020 |
| Plasmodium falciparum genetic variation of var2csa in the Democratic Republic of the Congo R Verity, NJ Hathaway, A Waltmann, SM Doctor, OJ Watson, JC Patel, ... Malaria journal 17 (1), 46, 2018 | 17 | 2018 |
| Longitudinal pooled deep sequencing of the Plasmodium vivax K12 kelch gene in Cambodia reveals a lack of selection by artemisinin NF Brazeau, N Hathaway, CM Parobek, JT Lin, JA Bailey, C Lon, ... The American journal of tropical medicine and hygiene 95 (6), 1409-1412, 2016 | 11 | 2016 |
| Plasmodium falciparum DHFR and DHPS mutations are associated with HIV-1 co-infection and a novel DHPS mutation I504T is identified in Western Kenya BK Torrevillas, SM Garrison, AJ Mckeeken, D Patel, JT Van Leuven, ... Frontiers in Cellular and Infection Microbiology 10, 732, 2020 | 7 | 2020 |
| Efficient Transmission of Mixed Plasmodium falciparum/vivax Infections From Humans to Mosquitoes S Balasubramanian, RS Rahman, C Lon, C Parobek, R Ubalee, ... The Journal of infectious diseases, 2019 | 6 | 2019 |
