The Norway spruce genome sequence and conifer genome evolution B Nystedt, NR Street, A Wetterbom, A Zuccolo, YC Lin, DG Scofield, ... Nature 497 (7451), 579-584, 2013 | 1565 | 2013 |
Evolution after gene duplication: models, mechanisms, sequences, systems, and organisms C Roth, S Rastogi, L Arvestad, K Dittmar, S Light, D Ekman, DA Liberles Journal of Experimental Zoology Part B: Molecular and Developmental …, 2007 | 231 | 2007 |
Bayesian gene/species tree reconciliation and orthology analysis using MCMC L Arvestad, AC Berglund, J Lagergren, B Sennblad Bioinformatics 19 (suppl 1), i7, 2003 | 220 | 2003 |
Simultaneous Bayesian gene tree reconstruction and reconciliation analysis Ö Åkerborg, B Sennblad, L Arvestad, J Lagergren Proceedings of the National Academy of Sciences 106 (14), 5714, 2009 | 211 | 2009 |
The genome sequence of black cottonwood (Populus trichocarpa) reveals 18 conserved cellulose synthase (CesA) genes S Djerbi, M Lindskog, L Arvestad, F Sterky, TT Teeri Planta 221, 739-746, 2005 | 184 | 2005 |
BESST-Efficient scaffolding of large fragmented assemblies K Sahlin, F Vezzi, B Nystedt, J Lundeberg, L Arvestad BMC Bioinformatics 15 (1), 281, 2014 | 169 | 2014 |
Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution L Arvestad, AC Berglund, J Lagergren, B Sennblad Proceedings of the eighth annual international conference on Research in …, 2004 | 165 | 2004 |
The gene evolution model and computing its associated probabilities L Arvestad, J Lagergren, B Sennblad Journal of the ACM (JACM) 56 (2), 7, 2009 | 107 | 2009 |
Genome-wide survey for biologically functional pseudogenes Ö Svensson, L Arvestad, J Lagergren PLoS computational biology 2 (5), e46, 2006 | 101 | 2006 |
A Bayesian method for analyzing lateral gene transfer J Sjöstrand, A Tofigh, V Daubin, L Arvestad, B Sennblad, J Lagergren Systematic Biology 63 (3), 409-420, 2014 | 98 | 2014 |
MAP20, a microtubule-associated protein in the secondary cell walls of hybrid aspen, is a target of the cellulose synthesis inhibitor 2, 6-dichlorobenzonitrile AS Rajangam, M Kumar, H Aspeborg, G Guerriero, L Arvestad, P Pansri, ... Plant Physiology 148 (3), 1283-1294, 2008 | 92 | 2008 |
GAM-NGS: genomic assemblies merger for next generation sequencing R Vicedomini, F Vezzi, S Scalabrin, L Arvestad, A Policriti BMC Bioinformatics 14 (Suppl 7), S6, 2013 | 88 | 2013 |
Classification of DNA sequences using Bloom filters H Stranneheim, M Käller, T Allander, B Andersson, L Arvestad, ... Bioinformatics 26 (13), 1595-1600, 2010 | 85 | 2010 |
mtDNA tandem repeats in domestic dogs and wolves: mutation mechanism studied by analysis of the sequence of imperfect repeats P Savolainen, L Arvestad, J Lundeberg Molecular biology and evolution 17 (4), 474-488, 2000 | 74 | 2000 |
GenPhyloData: realistic simulation of gene family evolution J Sjöstrand, L Arvestad, J Lagergren, B Sennblad BMC Bioinformatics 14 (1), 209, 2013 | 51 | 2013 |
The mitogenome of Norway spruce and a reappraisal of mitochondrial recombination in plants AR Sullivan, Y Eldfjell, B Schiffthaler, N Delhomme, T Asp, KH Hebelstrup, ... Genome biology and evolution 12 (1), 3586-3598, 2020 | 48 | 2020 |
DLRS: gene tree evolution in light of a species tree J Sjöstrand, B Sennblad, L Arvestad, J Lagergren Bioinformatics 28 (22), 2994-2995, 2012 | 48 | 2012 |
Assembly scaffolding with PE-contaminated mate-pair libraries K Sahlin, R Chikhi, L Arvestad Bioinformatics 32 (13), 1925-1932, 2016 | 44 | 2016 |
A novel method for forensic DNA investigations: repeat-type sequence analysis of tandemly repeated mtDNA in domestic dogs P Savolainen, L Arvestad, J Lundberg Journal of Forensic Sciences 45 (5), 990-999, 2000 | 43 | 2000 |
Quantitative synteny scoring improves homology inference and partitioning of gene families RH Ali, SA Muhammad, MA Khan, L Arvestad BMC Bioinformatics 14 (15), 1-9, 2013 | 37 | 2013 |