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OWL 2 web ontology language: Structural specification and functional-style syntax B Motik, PF Patel-Schneider, B Parsia, C Bock, A Fokoue, P Haase, ... W3C Recommendation 27, 2009 | 1045 | 2009 |
The ontology for biomedical investigations A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ... PloS one 11 (4), e0154556, 2016 | 376 | 2016 |
Advancing translational research with the Semantic Web A Ruttenberg, T Clark, W Bug, M Samwald, O Bodenreider, H Chen, ... BMC bioinformatics 8, 1-16, 2007 | 349 | 2007 |
Modeling biomedical experimental processes with OBI RR Brinkman, M Courtot, D Derom, JM Fostel, Y He, P Lord, J Malone, ... Journal of biomedical semantics 1, 1-11, 2010 | 327 | 2010 |
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability AD Diehl, TF Meehan, YM Bradford, MH Brush, WM Dahdul, DS Dougall, ... Journal of biomedical semantics 7, 1-10, 2016 | 246 | 2016 |
Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015 | 232 | 2015 |
OntoFox: web-based support for ontology reuse Z Xiang, M Courtot, RR Brinkman, A Ruttenberg, Y He BMC research notes 3, 1-12, 2010 | 230 | 2010 |
The SWAN biomedical discourse ontology P Ciccarese, E Wu, G Wong, M Ocana, J Kinoshita, A Ruttenberg, T Clark Journal of biomedical informatics 41 (5), 739-751, 2008 | 180 | 2008 |
Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration E Ong, Z Xiang, B Zhao, Y Liu, Y Lin, J Zheng, C Mungall, M Courtot, ... Nucleic acids research 45 (D1), D347-D352, 2017 | 162 | 2017 |
Ontobee: A Linked Data Server and Browser for Ontology Terms Z Xiang, C Mungall, A Ruttenberg, Y He International Conference on Biomedical Ontology, 2011 | 157 | 2011 |
MIREOT: the minimum information to reference an external ontology term M Courtot, F Gibson, AL Lister, J Malone, D Schober, RR Brinkman, ... Applied Ontology 6 (1), 23-33, 2011 | 155 | 2011 |
Life sciences on the Semantic Web: the Neurocommons and beyond A Ruttenberg, JA Rees, M Samwald, MS Marshall Briefings in bioinformatics 10 (2), 193-204, 2009 | 144 | 2009 |
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ... Database 2021, baab069, 2021 | 140 | 2021 |
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities DA Natale, CN Arighi, JA Blake, J Bona, C Chen, SC Chen, KR Christie, ... Nucleic acids research 45 (D1), D339-D346, 2017 | 98 | 2017 |
Protein Ontology: a controlled structured network of protein entities DA Natale, CN Arighi, JA Blake, CJ Bult, KR Christie, J Cowart, ... Nucleic acids research 42 (D1), D415-D421, 2014 | 88 | 2014 |
MIREOT: the minimum information to reference an external ontology term M Courtot, F Gibson, A Lister, J Malone, D Schober, RR Brinkman, ... Aug-2009, 2009 | 76 | 2009 |
Basic Formal Ontology 2.0: Specification and user’s guide B Smith, M Almeida, J Bona, M Brochhausen, W Ceusters, M Courtot, ... National Center for Ontological Research: Buffalo, NY, USA, 2015 | 73 | 2015 |
BFO: Basic formal ontology JN Otte, J Beverley, A Ruttenberg Applied ontology 17 (1), 17-43, 2022 | 62 | 2022 |
Computational knowledge integration in biopharmaceutical research D Ficenec, M Osborne, J Pradines, D Richards, R Felciano, RJ Cho, ... Briefings in bioinformatics 4 (3), 260-278, 2003 | 56 | 2003 |