Clust: automatic extraction of optimal co-expressed gene clusters from gene expression data B Abu-Jamous, S Kelly Genome biology 19 (1), 172, 2018 | 171 | 2018 |
Integrative Cluster Analysis in Bioinformatics B Abu-Jamous, R Fa, AK Nandi John Wiley & Sons, 2015 | 116 | 2015 |
Linking brain responses to naturalistic music through analysis of ongoing EEG and stimulus features F Cong, V Alluri, AK Nandi, P Toiviainen, R Fa, B Abu-Jamous, L Gong, ... IEEE Transactions on Multimedia 15 (5), 1060-1069, 2013 | 80 | 2013 |
Paradigm of tunable clustering using binarization of consensus partition matrices (Bi-CoPaM) for gene discovery B Abu-Jamous, R Fa, DJ Roberts, AK Nandi PLoS One 8 (2), e56432, 2013 | 60 | 2013 |
Effect of explicit evaluation on neural connectivity related to listening to unfamiliar music C Liu, E Brattico, B Abu-Jamous, C Pereira, T Jacobsen, AK Nandi Frontiers in Human Neuroscience 11, 611, 2017 | 35 | 2017 |
Yeast gene CMR1/YDL156W is consistently co-expressed with genes participating in DNA-metabolic processes in a variety of stringent clustering experiments B Abu-Jamous, R Fa, DJ Roberts, AK Nandi Journal of the Royal Society Interface 10 (81), 20120990, 2013 | 34 | 2013 |
Towards tunable consensus clustering for studying functional brain connectivity during affective processing C Liu, B Abu-Jamous, E Brattico, AK Nandi International Journal of Neural Systems 27 (02), 1650042, 2017 | 30 | 2017 |
In vitro downregulated hypoxia transcriptome is associated with poor prognosis in breast cancer B Abu-Jamous, FM Buffa, AL Harris, AK Nandi Molecular cancer 16 (1), 1-19, 2017 | 29 | 2017 |
Distinct gene expression program dynamics during erythropoiesis from human induced pluripotent stem cells compared with adult and cord blood progenitors AT Merryweather-Clarke, AJ Tipping, AA Lamikanra, R Fa, B Abu-Jamous, ... BMC genomics 17 (1), 1-20, 2016 | 24 | 2016 |
Candidate regulators of early leaf development in maize perturb hormone signalling and secondary cell wall formation when constitutively expressed in rice P Wang, S Karki, A Biswal, HC Lin, MJ Dionora, G Rizal, X Yin, ... | 23 | 2017 |
UNCLES: method for the identification of genes differentially consistently co-expressed in a specific subset of datasets B Abu-Jamous, R Fa, DJ Roberts, AK Nandi BMC bioinformatics 16 (1), 1-19, 2015 | 19 | 2015 |
Associations of comorbidities and medications with COVID-19 outcome: A retrospective analysis of real-world evidence data B Abu-Jamous, A Anisimovich, J Baxter, L Mackillop, MP Vizcaychipi, ... MedRxiv, 2020.08. 20.20174169, 2020 | 17 | 2020 |
Comprehensive analysis of forty yeast microarray datasets reveals a novel subset of genes (APha-RiB) consistently negatively associated with ribosome biogenesis B Abu-Jamous, R Fa, DJ Roberts, AK Nandi BMC bioinformatics 15 (1), 1-20, 2014 | 13 | 2014 |
A modular steroid-inducible gene expression system for use in rice D Vlad, B Abu-Jamous, P Wang, JA Langdale BMC Plant Biology 19 (1), 1-14, 2019 | 12 | 2019 |
Identification of genes consistently co-expressed in multiple microarray datasets by a genome-wide Bi-CoPaM approach B Abu-Jamous, R Fa, DJ Roberts, AK Nandi 2013 IEEE International Conference on Acoustics, Speech and Signal …, 2013 | 10 | 2013 |
Prediction of the onset of cardiovascular diseases from electronic health records using multi-task gated recurrent units F Andreotti, FS Heldt, B Abu-Jamous, M Li, A Javer, O Carr, S Jovanovic, ... arXiv preprint arXiv:2007.08491, 2020 | 9 | 2020 |
MN scatter plots technique for evaluating varying-size clusters and setting the parameters of Bi-CoPaM and Uncles methods B Abu-Jamous, R Fa, DJ Roberts, AK Nandi 2014 IEEE International Conference on Acoustics, Speech and Signal …, 2014 | 8 | 2014 |
Binarization of Consensus Partition Matrix for Ensemble Clustering B Abu-Jamous, R Fa, AK Nandi, DJ Roberts 20th European Signal Processing Conference (EUSIPCO 2012), 2193-2197, 2012 | 8 | 2012 |
A role for neutral variation in the evolution of C4 photosynthesis S Karki, HC Lin, FR Danila, B Abu-Jamous, R Giuliani, DM Emms, ... bioRxiv, 2020 | 6 | 2020 |
Clustering consistency in neuroimaging data analysis C Liu, B Abu-Jamous, E Brattico, A Nandi 2015 12th International Conference on Fuzzy Systems and Knowledge Discovery …, 2015 | 5 | 2015 |