ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments A Lachmann, H Xu, J Krishnan, SI Berger, AR Mazloom, A Ma'ayan Bioinformatics 26 (19), 2438-2444, 2010 | 978 | 2010 |
Network analyses in systems pharmacology SI Berger, R Iyengar Bioinformatics 25 (19), 2466-2472, 2009 | 536 | 2009 |
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases S Berger, J Posner, A Ma'ayan BMC bioinformatics 8 (1), 372, 2007 | 172 | 2007 |
Systems pharmacology of arrhythmias SI Berger, A Ma’ayan, R Iyengar Science signaling 3 (118), ra30, 2010 | 150 | 2010 |
Role of systems pharmacology in understanding drug adverse events SI Berger, R Iyengar Wiley interdisciplinary reviews: systems biology and medicine 3 (2), 129-135, 2011 | 137 | 2011 |
Systems pharmacology and genome medicine: a future perspective AD Wist, SI Berger, R Iyengar Genome medicine 1, 1-9, 2009 | 101 | 2009 |
Cohesin complex-associated holoprosencephaly P Kruszka, SI Berger, V Casa, MR Dekker, J Gaesser, K Weiss, ... Brain 142 (9), 2631-2643, 2019 | 56 | 2019 |
Rapid deployment of a telemedicine care model for genetics and metabolism during COVID‐19 N Shur, SM Atabaki, MS Kisling, A Tabarani, C Williams, JL Fraser, ... American journal of medical genetics Part A 185 (1), 68-72, 2021 | 48 | 2021 |
A CCR4-NOT transcription complex, subunit 1, CNOT1, variant associated with holoprosencephaly P Kruszka, SI Berger, K Weiss, JL Everson, AF Martinez, S Hong, ... The American Journal of Human Genetics 104 (5), 990-993, 2019 | 42 | 2019 |
A systematic review of monogenic etiologies of nonimmune hydrops fetalis AM Quinn, BN Valcarcel, MM Makhamreh, HB Al-Kouatly, SI Berger Genetics in Medicine 23 (1), 3-12, 2021 | 41 | 2021 |
SNAVI: Desktop application for analysis and visualization of large-scale signaling networks A Ma'ayan, SL Jenkins, RL Webb, SI Berger, SP Purushothaman, ... BMC systems biology 3, 1-11, 2009 | 41 | 2009 |
Beyond the exome: what’s next in diagnostic testing for Mendelian conditions MH Wojcik, CM Reuter, S Marwaha, M Mahmoud, MH Duyzend, ... The American Journal of Human Genetics 110 (8), 1229-1248, 2023 | 39 | 2023 |
Loss-of-function variants in PPP1R12A: from isolated sex reversal to holoprosencephaly spectrum and urogenital malformations JJ Hughes, E Alkhunaizi, P Kruszka, LC Pyle, DK Grange, SI Berger, ... The American Journal of Human Genetics 106 (1), 121-128, 2020 | 38 | 2020 |
Loss of function in ROBO1 is associated with tetralogy of Fallot and septal defects P Kruszka, P Tanpaiboon, K Neas, K Crosby, SI Berger, AF Martinez, ... Journal of Medical Genetics 54 (12), 825-829, 2017 | 36 | 2017 |
Exome analysis of Smith–Magenis-like syndrome cohort identifies de novo likely pathogenic variants SI Berger, C Ciccone, KL Simon, MC Malicdan, T Vilboux, C Billington, ... Human genetics 136, 409-420, 2017 | 36 | 2017 |
Systematic analysis of the effect of multiple templates on the accuracy of comparative models of protein structure S Chakravarty, S Godbole, B Zhang, S Berger, R Sanchez BMC structural biology 8, 1-13, 2008 | 36 | 2008 |
AVIS: AJAX viewer of interactive signaling networks SI Berger, R Iyengar, A Ma’ayan Bioinformatics 23 (20), 2803-2805, 2007 | 36 | 2007 |
High diagnosis rate for nonimmune hydrops fetalis with prenatal clinical exome from the Hydrops-Yielding Diagnostic Results of Prenatal Sequencing (HYDROPS) Study HB Al-Kouatly, MM Makhamreh, SM Rice, K Smith, C Harman, A Quinn, ... Genetics in Medicine 23 (7), 1325-1333, 2021 | 34 | 2021 |
Lysosomal storage disease spectrum in nonimmune hydrops fetalis: a retrospective case control study HB Al‐Kouatly, L Felder, MM Makhamreh, SL Kass, NL Vora, V Berghella, ... Prenatal diagnosis 40 (6), 738-745, 2020 | 32 | 2020 |
Common genetic causes of holoprosencephaly are limited to a small set of evolutionarily conserved driver genes of midline development coordinated by TGF‐β, hedgehog, and FGF … E Roessler, P Hu, J Marino, S Hong, R Hart, S Berger, A Martinez, Y Abe, ... Human Mutation 39 (10), 1416-1427, 2018 | 31 | 2018 |