| Deep sequencing of blood and gut T-cell receptor β-chains reveals gluten-induced immune signatures in celiac disease DA Yohannes, TL Freitag, A de Kauwe, K Kaukinen, K Kurppa, P Wacklin, ... Scientific Reports 7 (1), 17977, 2017 | 30 | 2017 |
| HLA RNA sequencing with unique molecular identifiers reveals high allele-specific variability in mRNA expression T Johansson, DA Yohannes, S Koskela, J Partanen, P Saavalainen Frontiers in Immunology 12, 629059, 2021 | 19 | 2021 |
| Small RNA expression and miRNA modification dynamics in human oocytes and early embryos P Paloviita, C Hydén-Granskog, DA Yohannes, P Paluoja, J Kere, ... Genome Research 31 (8), 1474-1485, 2021 | 18 | 2021 |
| Human thymic T cell repertoire is imprinted with strong convergence to shared sequences N Heikkilä, R Vanhanen, DA Yohannes, I Kleino, IP Mattila, J Saramäki, ... Molecular Immunology 127, 112-123, 2020 | 16 | 2020 |
| Independent and cumulative coeliac disease-susceptibility loci are associated with distinct disease phenotypes JXM Cerqueira, P Saavalainen, K Kurppa, P Laurikka, H Huhtala, ... Journal of Human Genetics 66 (6), 613-623, 2021 | 13 | 2021 |
| Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences DA Yohannes, K Kaukinen, K Kurppa, P Saavalainen, D Greco BMC bioinformatics 22, 1-21, 2021 | 9 | 2021 |
| Targeted RNA-based Oxford nanopore sequencing for typing 12 classical HLA genes T Johansson, S Koskela, DA Yohannes, J Partanen, P Saavalainen Frontiers in Genetics 12, 635601, 2021 | 7 | 2021 |
| Identifying the inheritable component of human thymic T cell repertoire generation in monozygous twins N Heikkilä, R Vanhanen, DA Yohannes, P Saavalainen, S Meri, ... Eur. J. Immunol. 50 (5), 748-751, 2020 | 7 | 2020 |
| Steroidogenic factor 1 (NR5A1) induces multiple transcriptional changes during differentiation of human gonadal-like cells K Sepponen, K Lundin, DA Yohannes, S Vuoristo, D Balboa, M Poutanen, ... Differentiation 128, 83-100, 2022 | 6 | 2022 |
| Effects of In Vivo Gluten Challenge on PBMC Gene Expression Profiles in Diet Treated Celiac Disease DA Yohannes, A De Kauwe, K Kaukinen, K Kurppa, M Mäki, RP Anderson, ... Frontiers in Immunology 11, 594243, 2020 | 5 | 2020 |
| Increased type 1 inflammation in gynecologic cervicovaginal samples in patients with APS-1 I Hetemäki, V Saari, DA Yohannes, E Holopainen, T Holster, S Jokiranta, ... Journal of Allergy and Clinical Immunology, 2024 | 3 | 2024 |
| Characterization of human T cell receptor repertoire data in eight thymus samples and four related blood samples N Heikkilä, I Kleino, R Vanhanen, DA Yohannes, IP Mattila, J Saramäki, ... Data in Brief 35, 106751, 2021 | 3 | 2021 |
| Dissecting the contribution of single nucleotide polymorphisms in CCR9 and CCL25 genomic regions to the celiac disease phenotype L Airaksinen, JXM Cerqueira, H Huhtala, P Saavalainen, DA Yohannes, ... Journal of translational autoimmunity 4, 100128, 2021 | 2 | 2021 |
| HLA RNAseq reveals high allele-specific variability in mRNA expression T Johansson, DA Yohannes, S Koskela, J Partanen, P Saavalainen bioRxiv, 413534, 2018 | 2 | 2018 |
| CRISPR/Cas9-mediated activation of NR5A1 steers female human embryonic stem cell-derived bipotential gonadal-like cells towards a steroidogenic cell fate L Danti, K Lundin, K Sepponen, DA Yohannes, J Kere, T Tuuri, ... Journal of Ovarian Research 16 (1), 194, 2023 | 1 | 2023 |
| Human pluripotent stem cell-derived cells endogenously expressing follicle-stimulating hormone receptors: modeling the function of an inactivating receptor mutation K Lundin, K Sepponen, P Väyrynen, X Liu, DA Yohannes, M Survila, ... Molecular Human Reproduction 28 (5), gaac012, 2022 | 1 | 2022 |
| Independent single nucleotide polymorphisms are associated with clinical and histological non-recovery in longterm treated celiac disease patients JM Cerqueira, P Saavalainen, K Kurppa, P Laurikka, H Pekki, H Huhtala, ... EUROPEAN JOURNAL OF HUMAN GENETICS 32, 788-789, 2024 | | 2024 |
| Deep cervical lymph nodes of patients with multiple sclerosis show dysregulated B cells in the presence of Epstein-Barr virus J Sarkkinen, D Yohannes, N Kreivi, P Dürnsteiner, J Huuhtanen, ... medRxiv, 2023.10. 22.23297386, 2023 | | 2023 |
| Cervical lymph nodes in patients with multiple sclerosis show an overrepresentation of memory B cells and a disturbed germinal center reaction J Sarkkinen, D Yohannes, M Perdomo, P Durnsteiner, G Kurdo, R Linden, ... MULTIPLE SCLEROSIS JOURNAL 29, 483-483, 2023 | | 2023 |
| The effect of Nuclear Receptor Subfamily 5 Group A Member 1 (NR5A1) in human ovarian somatic cell development L Danti, K Lundin, K Sepponen, DA Yohannes, J Kere, T Tuuri, ... HUMAN REPRODUCTION 37, I560-I560, 2022 | | 2022 |
