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| An integrated map of genetic variation from 1,092 human genomes. GR Abecasis, A Auton, LD Brooks, MA DePristo, RM Durbin, ... Nature 491 (7422), 56, 2012 | 8290* | 2012 |
| An integrated map of structural variation in 2,504 human genomes PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ... Nature 526 (7571), 75-81, 2015 | 2384 | 2015 |
| Mapping copy number variation by population-scale genome sequencing RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ... Nature 470 (7332), 59-65, 2011 | 1285 | 2011 |
| Multi-platform discovery of haplotype-resolved structural variation in human genomes MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Nature communications 10 (1), 1784, 2019 | 765 | 2019 |
| Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants D Pinto, K Darvishi, X Shi, D Rajan, D Rigler, T Fitzgerald, AC Lionel, ... Nature biotechnology 29 (6), 512-520, 2011 | 480 | 2011 |
| Haplotype-resolved diverse human genomes and integrated analysis of structural variation P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ... Science 372 (6537), eabf7117, 2021 | 448 | 2021 |
| Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel O Delaneau, J Marchini Nature communications 5 (1), 3934, 2014 | 439 | 2014 |
| Integrative annotation of variants from 1092 humans: application to cancer genomics E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ... Science 342 (6154), 1235587, 2013 | 422 | 2013 |
| A survey of social-based routing in delay tolerant networks: Positive and negative social effects Y Zhu, B Xu, X Shi, Y Wang IEEE Communications Surveys & Tutorials 15 (1), 387-401, 2012 | 422 | 2012 |
| A deep auto-encoder model for gene expression prediction R Xie, J Wen, A Quitadamo, J Cheng, X Shi BMC genomics 18, 39-49, 2017 | 126 | 2017 |
| The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation LK McNeil, C Reich, RK Aziz, D Bartels, M Cohoon, T Disz, RA Edwards, ... Nucleic acids research 35 (suppl_1), D347-D353, 2007 | 121 | 2007 |
| Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis KH Brown, KP Dobrinski, AS Lee, O Gokcumen, RE Mills, X Shi, ... Proceedings of the National Academy of Sciences 109 (2), 529-534, 2012 | 114 | 2012 |
| Effects of short indels on protein structure and function in human genomes M Lin, S Whitmire, J Chen, A Farrel, X Shi, J Guo Scientific reports 7 (1), 9313, 2017 | 107 | 2017 |
| DeepDSC: a deep learning method to predict drug sensitivity of cancer cell lines M Li, Y Wang, R Zheng, X Shi, Y Li, FX Wu, J Wang IEEE/ACM transactions on computational biology and bioinformatics 18 (2 …, 2019 | 99 | 2019 |
| Human-specific tandem repeat expansion and differential gene expression during primate evolution A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ... Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019 | 96 | 2019 |
| Accurate recognition of colorectal cancer with semi-supervised deep learning on pathological images G Yu, K Sun, C Xu, XH Shi, C Wu, T Xie, RQ Meng, XH Meng, KS Wang, ... Nature communications 12 (1), 6311, 2021 | 88 | 2021 |
| An overview of human genetic privacy X Shi, X Wu Annals of the New York Academy of Sciences 1387 (1), 61-72, 2017 | 82 | 2017 |
| Refinement of primate copy number variationhotspots identifies candidate genomic regions evolving under positive selection O Gokcumen, PL Babb, RC Iskow, Q Zhu, X Shi, RE Mills, I Ionita-Laza, ... Genome Biology 12, 1-11, 2011 | 74 | 2011 |
