Divergent clonal evolution of castration-resistant neuroendocrine prostate cancer H Beltran, D Prandi, JM Mosquera, M Benelli, L Puca, J Cyrta, C Marotz, ... Nature medicine 22 (3), 298-305, 2016 | 1453 | 2016 |
Genomic correlates of clinical outcome in advanced prostate cancer W Abida, J Cyrta, G Heller, D Prandi, J Armenia, I Coleman, M Cieslik, ... Proceedings of the National Academy of Sciences 116 (23), 11428-11436, 2019 | 1048 | 2019 |
SOX2 promotes lineage plasticity and antiandrogen resistance in TP53-and RB1-deficient prostate cancer P Mu, Z Zhang, M Benelli, WR Karthaus, E Hoover, CC Chen, ... Science 355 (6320), 84-88, 2017 | 907 | 2017 |
N-Myc induces an EZH2-mediated transcriptional program driving neuroendocrine prostate cancer E Dardenne, H Beltran, M Benelli, K Gayvert, A Berger, L Puca, J Cyrta, ... Cancer cell 30 (4), 563-577, 2016 | 513 | 2016 |
Patient derived organoids to model rare prostate cancer phenotypes L Puca, R Bareja, D Prandi, R Shaw, M Benelli, WR Karthaus, J Hess, ... Nature communications 9 (1), 2404, 2018 | 303 | 2018 |
EXCAVATOR: detecting copy number variants from whole-exome sequencing data A Magi, L Tattini, I Cifola, R D’Aurizio, M Benelli, E Mangano, C Battaglia, ... Genome biology 14, 1-18, 2013 | 255 | 2013 |
Discovering chimeric transcripts in paired-end RNA-seq data by using EricScript M Benelli, C Pescucci, G Marseglia, M Severgnini, F Torricelli, A Magi Bioinformatics 28 (24), 3232-3239, 2012 | 194 | 2012 |
Circulating tumor DNA profile recognizes transformation to castration-resistant neuroendocrine prostate cancer H Beltran, A Romanel, V Conteduca, N Casiraghi, M Sigouros, ... The Journal of clinical investigation 130 (4), 1653-1668, 2020 | 158 | 2020 |
Mechanisms of resistance to CDK4/6 inhibitors: potential implications and biomarkers for clinical practice A McCartney, I Migliaccio, M Bonechi, C Biagioni, D Romagnoli, ... Frontiers in oncology 9, 666, 2019 | 139 | 2019 |
Bioinformatics for next generation sequencing data A Magi, M Benelli, A Gozzini, F Girolami, F Torricelli, ML Brandi Genes 1 (2), 294-307, 2010 | 127 | 2010 |
H 3 M 2 : detection of runs of homozygosity from whole-exome sequencing data A Magi, L Tattini, F Palombo, M Benelli, A Gialluisi, B Giusti, R Abbate, ... Bioinformatics 30 (20), 2852-2859, 2014 | 118 | 2014 |
Read count approach for DNA copy number variants detection A Magi, L Tattini, T Pippucci, F Torricelli, M Benelli Bioinformatics 28 (4), 470-478, 2012 | 109 | 2012 |
Genomic and transcriptomic analyses of breast cancer primaries and matched metastases in AURORA, the Breast International Group (BIG) molecular screening initiative P Aftimos, M Oliveira, A Irrthum, D Fumagalli, C Sotiriou, EN Gal-Yam, ... Cancer discovery 11 (11), 2796-2811, 2021 | 101 | 2021 |
Differential impact of RB status on E2F1 reprogramming in human cancer C McNair, K Xu, AC Mandigo, M Benelli, B Leiby, D Rodrigues, J Lindberg, ... The Journal of clinical investigation 128 (1), 341-358, 2018 | 101 | 2018 |
Novel α-actinin 2 variant associated with familial hypertrophic cardiomyopathy and juvenile atrial arrhythmias: a massively parallel sequencing study F Girolami, M Iascone, B Tomberli, S Bardi, M Benelli, G Marseglia, ... Circulation: Cardiovascular Genetics 7 (6), 741-750, 2014 | 96 | 2014 |
Role of specialized composition of SWI/SNF complexes in prostate cancer lineage plasticity J Cyrta, A Augspach, MR De Filippo, D Prandi, P Thienger, M Benelli, ... Nature communications 11 (1), 5549, 2020 | 94 | 2020 |
Detecting common copy number variants in high-throughput sequencing data by using JointSLM algorithm A Magi, M Benelli, S Yoon, F Roviello, F Torricelli Nucleic acids research 39 (10), e65-e65, 2011 | 90 | 2011 |
Cyclin E1 and Rb modulation as common events at time of resistance to palbociclib in hormone receptor-positive breast cancer C Guarducci, M Bonechi, M Benelli, C Biagioni, G Boccalini, D Romagnoli, ... NPJ breast cancer 4 (1), 38, 2018 | 89 | 2018 |
372 kb microdeletion in 18q12. 3 causing SETBP1 haploinsufficiency associated with mild mental retardation and expressive speech impairment G Marseglia, MR Scordo, C Pescucci, G Nannetti, E Biagini, V Scandurra, ... European journal of medical genetics 55 (3), 216-221, 2012 | 88 | 2012 |
Clinical significance of rare copy number variations in epilepsy: a case-control survey using microarray-based comparative genomic hybridization P Striano, A Coppola, R Paravidino, M Malacarne, S Gimelli, A Robbiano, ... Archives of neurology 69 (3), 322-330, 2012 | 83 | 2012 |