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Lokesh Baweja
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Effect of graphene oxide on the conformational transitions of amyloid beta peptide: A molecular dynamics simulation study
L Baweja, K Balamurugan, V Subramanian, A Dhawan
Journal of Molecular Graphics and Modelling 61, 175-185, 2015
832015
Hydration patterns of graphene-based nanomaterials (GBNMs) play a major role in the stability of a helical protein: a molecular dynamics simulation study
L Baweja, K Balamurugan, V Subramanian, A Dhawan
Langmuir 29 (46), 14230-14238, 2013
592013
Effects of surface curvature and surface characteristics of carbon-based nanomaterials on the adsorption and activity of acetylcholinesterase
T Mesarič, L Baweja, B Drašler, D Drobne, D Makovec, P Dušak, ...
Carbon 62, 222-232, 2013
582013
C60-fullerene binds with the ATP binding domain of human DNA topoiosmerase II alpha
L Baweja, D Gurbani, R Shanker, AK Pandey, V Subramanian, A Dhawan
Journal of biomedical nanotechnology 7 (1), 177-178, 2011
392011
Nucleosome composition regulates the histone H3 tail conformational ensemble and accessibility
EA Morrison, L Baweja, MG Poirier, J Wereszczynski, CA Musselman
Nucleic acids research 49 (8), 4750-4767, 2021
322021
Carbamylation promotes amyloidogenesis and induces structural changes in Tau-core hexapeptide fibrils
VG KrishnaKumar, L Baweja, K Ralhan, S Gupta
Biochimica et Biophysica Acta (BBA)-General Subjects 1862 (12), 2590-2604, 2018
322018
Interaction of C60 fullerene with the proteins involved in DNA mismatch repair pathway
SK Gupta, L Baweja, D Gurbani, AK Pandey, A Dhawan
Journal of biomedical nanotechnology 7 (1), 179-180, 2011
302011
Pushing the limits of structure-based models: prediction of nonglobular protein folding and fibrils formation with go-model simulations
L Baweja, J Roche
The Journal of Physical Chemistry B 122 (9), 2525-2535, 2018
82018
Computational Approaches for Predicting Nanotoxicity at the Molecular Level
L Baweja, A Dhawan
62017
Impact of graphene-based nanomaterials (GBNMs) on the structural and functional conformations of hepcidin peptide
KP Singh, L Baweja, O Wolkenhauer, Q Rahman, SK Gupta
Journal of Computer-Aided Molecular Design 32, 487-496, 2018
52018
Preferential binding of fullerene and fullerenol with the N-terminal and middle regions of amyloid beta peptide: an in silico investigation
V Pandya, L Baweja, A Dhawan
International Journal of Nanomedicine 13 (sup1), 71-73, 2018
42018
Peptide Dynamics and Metadynamics: Leveraging Enhanced Sampling Molecular Dynamics to Robustly Model Long-Timescale Transitions
J Clayton, L Baweja, J Wereszczynski
Computational Peptide Science: Methods and Protocols, 151-167, 2022
32022
Computer simulations for understanding nanoparticle-biomolecule corona formation
L Baweja
32019
Conformational and Thermodynamic Differences Underlying Wild-Type and Mutant Eleven-Nineteen-Leukemia YEATS Domain Specificity for Epigenetic Marks
L Baweja, J Wereszczynski
Journal of chemical information and modeling 63 (4), 1229-1238, 2023
12023
Computational modeling uncovers the structural basis of ubiquitin-mediated modulation of nucleosome dynamics
L Baweja, JM Wereszczynski
Biophysical Journal 123 (3), 231a, 2024
2024
Unraveling the effects of ubiquitylation on nucleosome assembly and dynamics with coarse-grain simulations
L Baweja, JM Wereszczynski
Biophysical Journal 122 (3), 494a, 2023
2023
Conformational and Thermodynamic Differences Underlying Wild-type and Mutant YEATS Domain Specificity for Epigenetic Marks
L Baweja, J Wereszczynski
bioRxiv, 2022.07. 14.500085, 2022
2022
Conformational and Thermodynamic Differences Underlying Wild-type and Mutant ENL YEATS Domain Specificity for Epigenetic Marks
L Baweja, J Wereszczynski
2022
Nucleosome Assembly State Governs Histone H3 Tail Conformation and Dynamics
EA Morrison, L Baweja, JM Wereszczynski, CA Musselman
Biophysical Journal 118 (3), 377a-378a, 2020
2020
Histone Tails Dynamics in Canonical and Subnucleosomal Particles Investigated with Molecular Dynamics Simulations
L Baweja, EA Morrison, CA Musselman, JM Wereszczynski
Biophysical Journal 118 (3), 225a, 2020
2020
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